Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0919 ATGATTATGATGATTAGAGAATGGAAGGATATTCCAGTTGAACTTCTGATGCAGATTTTATCACTTTTAGATGATCAAACGGTTATTACAGCTTCTCATGTTTGCCATGGCTGGAGAGATTCCATTTCTTTTGGTCTCACCCACTTATCACTCTCATGGTGTAGCAAGAACATGAATAACTTGGTTCTATCTCTAGCTCCTAAGTTTACAAAGTTGCAAACTCTAATCCTTCGACAAGACAAGCCTCAACTTGAGGACAATGCTGTTGAGGCTGTTTCAAAATTCTGTCCCGACCTGCAGGTTCTGGACCTCACCAAAAGTTTCAAGCTTACCGATCGTTCGCTGTATGCTATAGCTTTAGGTTGTTGTGATCTTAGAAAACTCAACATCAGTGGCTGTTCGGCTTTTAGTGACAAAGCTTTGGCTTATCTAGCTAGTTTATGCAGAAAGCTGAAAGTTTTGAATCTGTGTGGTTGTGTTAAAGCTGTATCAGATACTGCATTACAGGCAATTGGAGATTACTGCAATGAGTTACAGTTTTTGAACCTTGGATGGTGTGAACAAATAAGTGATGTTGGAGTGATGAGTTTAGCATATGGATGCCCTGATCTTAGAACACTTGACTTATGTGGTTGTGTCCTTATAACAGCATTGGCAAATAGGTGTCCTCATCTGAGGTCACTTGGGCTGTACTACTGCAAAAACATAACAGACAGAGCAATGTATTCATTGGCACAGAGCAAAGTGAAAAACAAGATGAGGATGTTTAAGGACTTTGAACATTAG 786 0.3969 MIMMIREWKDIPVELLMQILSLLDDQTVITASHVCHGWRDSISFGLTHLSLSWCSKNMNNLVLSLAPKFTKLQTLILRQDKPQLEDNAVEAVSKFCPDLQVLDLTKSFKLTDRSLYAIALGCCDLRKLNISGCSAFSDKALAYLASLCRKLKVLNLCGCVKAVSDTALQAIGDYCNELQFLNLGWCEQISDVGVMSLAYGCPDLRTLDLCGCVLITALANRCPHLRSLGLYYCKNITDRAMYSLAQSKVKNKMRMFKDFEH* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0919 261 Pfam F-box-like 9 42 IPR001810 GO:0005515
Psa6g0919 261 Gene3D Ribonuclease Inhibitor 4 259 IPR032675 -
Psa6g0919 261 Pfam Leucine Rich repeat 175 198 IPR001611 GO:0005515
Psa6g0919 261 Pfam Leucine Rich repeat 222 245 IPR001611 GO:0005515
Psa6g0919 261 PANTHER UNCHARACTERIZED 4 252 - -
Psa6g0919 261 SUPERFAMILY RNI-like 43 246 - -
Psa6g0919 261 PANTHER F-BOX SKP2A-LIKE PROTEIN 4 252 - -
Psa6g0919 261 SMART LRR_CC_2 69 95 IPR006553 -
Psa6g0919 261 SMART LRR_CC_2 96 121 IPR006553 -
Psa6g0919 261 SMART LRR_CC_2 175 200 IPR006553 -
Psa6g0919 261 SMART LRR_CC_2 222 247 IPR006553 -
Psa6g0919 261 SMART LRR_CC_2 148 174 IPR006553 -
Psa6g0919 261 SMART LRR_CC_2 122 147 IPR006553 -
Psa6g0919 261 SMART LRR_CC_2 43 68 IPR006553 -
Psa6g0919 261 SMART LRR_CC_2 201 221 IPR006553 -
Psa6g0919 261 SUPERFAMILY F-box domain 8 47 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0919 Psa-Chr6 34530457 34531634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0919 K03875 - gmx:121173056 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0919 6 34530457 34531634 Psa6g0919 6 34530457 34531634 ECH