Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0918 ATGGTGAAGGAAACAGAGTATTACGATATCCTCGGAGTCTCTCCCTCTGCTTCCGATGATCAAATTCGCAAGGCTTATTATCAAAAGGCAAAGCAAGTTCATCCTGATAGAAACCAAAACGATCCTAATGCTGCACACAAGTTCCAGATTTTGGGCGAAGCATATCAGGTTTTGAGTGATCCAGTGCAGAGGAAAGGGTATGATCAAAATGGAAAGCATTCTGTATCTAGAGAAACTATGCTTGACCCAATGGCTGTCTTTGCCCTGCTCTTTGGAAGTGAATTGTTTGAAGACTACGTTGGGCATCTAGCTGTTGCATCAATGGCTTCTTCTGAACTAGCGGATGAAAGTGAGAAGATTTGCAGGAAAGCTAAAGCAAGTGTGCTGCCAGAAAAAAGGGAAGAAAAGCTAGCAAGATTTTTGAAAGATTGTCTTAGCCAATATGTCCGCGGTGACCAAAAAGGTTTTTTGCAGCGCGCTGAATCTGAAGCAAAACGGCTTTCTCATGCAGCTTTTGGAGTTGACATGTTACATACTATTGGCTATATATACTCAAGACAAGCAGCACAAGAACTAGGGAAAAAGGCCCTTTATCTTGGAGTGCCATTTCTGGCTGAATGGGTTCGCAATAAAGGACACTTTTGGAAATCACAGTTAACAGCTGCTAAAGGTGCTTTTCAGTTGCTCCAACTTCAAGAAGAACTCAGCAAGCAATTTAAAGCGGGTGGTGGTCGCCCTGAAAATGTTGACTCCCATATTCGTCTTAATAAGGATACTTTGTTGAATTCACTGTGGAAGTTAAATGTAGTGGACATAGAAGTAACCCTTGCACACGTGTGTCAAATGGTGCTAAAGGAAAATAATGTTCGGAAAGAGGAACTTAGAGTTCGAGCTATCGCTCTTAAAATTCTTGGGAAGATATTTCAGGAAAAGAATGCAAAAGGAGAAACACTGAAGAAGAAACACACTGTTGATTCTGATGATGAAGGAGGCAGTTCTGATTCATCAGACGATGAATCATCTCATAGAGCACTTACCTACCGAACTCCCTTTTTCAATCAGGGTATTGGTAGGCTCTTCAAATGTCTTTGTAATCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAAAAGCTAA 1140 0.4114 MVKETEYYDILGVSPSASDDQIRKAYYQKAKQVHPDRNQNDPNAAHKFQILGEAYQVLSDPVQRKGYDQNGKHSVSRETMLDPMAVFALLFGSELFEDYVGHLAVASMASSELADESEKICRKAKASVLPEKREEKLARFLKDCLSQYVRGDQKGFLQRAESEAKRLSHAAFGVDMLHTIGYIYSRQAAQELGKKALYLGVPFLAEWVRNKGHFWKSQLTAAKGAFQLLQLQEELSKQFKAGGGRPENVDSHIRLNKDTLLNSLWKLNVVDIEVTLAHVCQMVLKENNVRKEELRVRAIALKILGKIFQEKNAKGETLKKKHTVDSDDEGGSSDSSDDESSHRALTYRTPFFNQGIGRLFKCLCNPAFDVDDEEIVYKS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0918 379 Pfam DnaJ domain 6 68 IPR001623 -
Psa6g0918 379 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Psa6g0918 379 MobiDBLite consensus disorder prediction 319 341 - -
Psa6g0918 379 CDD DnaJ 6 60 IPR001623 -
Psa6g0918 379 SMART dnaj_3 5 63 IPR001623 -
Psa6g0918 379 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 364 - -
Psa6g0918 379 Pfam X-domain of DnaJ-containing 131 315 IPR026894 -
Psa6g0918 379 PRINTS DnaJ domain signature 8 26 IPR001623 -
Psa6g0918 379 PRINTS DnaJ domain signature 26 41 IPR001623 -
Psa6g0918 379 PRINTS DnaJ domain signature 43 63 IPR001623 -
Psa6g0918 379 PRINTS DnaJ domain signature 63 82 IPR001623 -
Psa6g0918 379 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 364 - -
Psa6g0918 379 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Psa6g0918 379 Gene3D DnaJ domain 1 85 IPR036869 -
Psa6g0918 379 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0918 Psa-Chr6 34526188 34529572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0918 7 81 Miscellaneous Gene Families AT1G16680 38.961 1.58e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0918 - - gmx:100793811 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0918 6 34526188 34529572 Psa6g0918 6 34526188 34529572 ECH