Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0879 ATGATAACGTGTCTCTTCTTGTTTCTTCTTCTTCCACAACTAACACATTCCAAGTCGCAGCCTTGTTTATCTTCTTCCTGTGGAAAAATCACAAACATAAGCGATCCATTCAGACTAAAACAAGACCCGGAACACTGTGGCAACAACAGAATCGATCAATTACAAAACGAGTTGGATTGTGTGAACAACGTTACGAGATTGAGTTTGTATGACGGTTACTATTTGGTAGAATCGATCAATTACAACAATTACACAATCCGAGTTGTTGACCCTAACATTCATCCCACCGATTGCTCCTCTCTCCCTCGCTTCTTCTTATCCCAAAACAACTTTACTTATTACGATGATTCAGAGCGAAGATACCATCCCAAAGAAAATAATTCATATCAGTACAGCTTAAATCGATTGCCTTACACGTATACATATTATCCCAATCCCGATCACATGGGATGGGCATTATCTGTGCCAGTGATATACATGAAGTGTACAAGTCCACCAAGTAAGGTTGTGGATAAGTACTATGTGGATACCGCTTCATGCTTGGATCAACACATGACATACGCTATTGTTGGGGACCCACCATTCGAAATAGTCGAACCTCAATGCCGTGTTAAGTTTATTGCCCTCACATCGTTCCTTTGGAATACTGGAGCTTCAAATATTTACTACGGCGCCGTTATAGAAAACATTTCATATATTGATATTCACAAAGCGCTACAGTATGGATTTGAAATTTCATGGATGCAAGCCAAGTGTCCTTGTGATGAGTGCTTCTTCAACGACACGATTGGCCAGATTCAATGTGTCGTACTCTTATGTGAATTCGGTTCTTGCG 835 0.4036 MITCLFLFLLLPQLTHSKSQPCLSSSCGKITNISDPFRLKQDPEHCGNNRIDQLQNELDCVNNVTRLSLYDGYYLVESINYNNYTIRVVDPNIHPTDCSSLPRFFLSQNNFTYYDDSERRYHPKENNSYQYSLNRLPYTYTYYPNPDHMGWALSVPVIYMKCTSPPSKVVDKYYVDTASCLDQHMTYAIVGDPPFEIVEPQCRVKFIALTSFLWNTGASNIYYGAVIENISYIDIHKALQYGFEISWMQAKCPCDECFFNDTIGQIQCVVLLCEFGSC 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0879 278 Pfam Wall-associated receptor kinase galacturonan-binding 22 90 IPR025287 GO:0030247
Psa6g0879 278 PANTHER OS01G0690200 PROTEIN 5 258 - -
Psa6g0879 278 PANTHER OS01G0113900 PROTEIN 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0879 Psa-Chr6 32331651 32332668 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0879 - - mtr:MTR_1g028150 301.597