Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0877 ATGGTAGTGACTCTGATTCTGAATATCCAATCACACACTCTTGTTCTAAAATCCACACGCGATTTTGCAGAACGAGGTGAAACGCTGCGTTTTGGATTGGGGTGTGAAAATATGAATGGAATTGGGAGTGGAAGTGGAAGGTTTAGTAACATGGAGATGGAATTTATAAGAAGACATCACCGGCACCAGCCTGGAAACAATCAGTGTGCTTCTGCTCTTGTTAAGCATATAAGAGCACCGGTTCCTCAGGTATGGTCTTTGGTTAGAAGGTTCGATCAGCCGCAAAAGTACAAACCATTCGTAAGCCGATGTGTTGTAACGGGAAACCTTGAGATTGGAAGTTTAAGAGAAGTTGATGTTAAGTCAGGGCTTCCTGCTACCACAAGTACAGAAAGGTTGGAGCTTCTTGATGACAATGAGCATGTTCTAAGCATCAAGATTATCGGCGGTGATCATAGGCTTACGAACTACTCGTCGGTGGTGTCACTCCACCCAGAAATTATTGATGGGAGGCCGGGTACACTGGTAATTGAATCTTTTGTGGTGGATATACCGGACGGAAACACTAAGGATGAGACCTGCTACTTTGTTGAAGCTGTGATTAAGTGCAATCTTAAATCACTTGCCGATGTCTCGGAAGGGATTGCTTTGCAAGACCGCACTGAACGAATTGATCGGATTTAG 684 0.4415 MVVTLILNIQSHTLVLKSTRDFAERGETLRFGLGCENMNGIGSGSGRFSNMEMEFIRRHHRHQPGNNQCASALVKHIRAPVPQVWSLVRRFDQPQKYKPFVSRCVVTGNLEIGSLREVDVKSGLPATTSTERLELLDDNEHVLSIKIIGGDHRLTNYSSVVSLHPEIIDGRPGTLVIESFVVDIPDGNTKDETCYFVEAVIKCNLKSLADVSEGIALQDRTERIDRI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0877 227 Pfam Polyketide cyclase / dehydrase and lipid transport 74 213 IPR019587 -
Psa6g0877 227 Gene3D - 40 222 IPR023393 -
Psa6g0877 227 PANTHER ABSCISIC ACID RECEPTOR PYL9-LIKE PROTEIN 50 224 - -
Psa6g0877 227 CDD PYR_PYL_RCAR_like 75 213 - -
Psa6g0877 227 SUPERFAMILY Bet v1-like 73 210 - -
Psa6g0877 227 PANTHER - 50 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0877 Psa-Chr6 31614563 31616745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0877 K14496 - gmx:100813825 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0877 6 31614563 31616745 Psa6g0877 6 31614563 31616745 ECH