Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0810 ATGGAAGAAGGTAACCGAAGAATGCTCGAGAGGGAGCGATACCAAATCGAACAGATTCTCGAGCTCGATCTCGAGGAGTTGCAGGTAGAAGAGGTCGACGAGTTTCACGATTCTTCCGACGACGACAACAACAACAACGACCACCGTGATCTTACGATTGGCTATGGTAGTGCAGGCGTCGTCCCTGGTGAATTCACTTACAACACTTGTATAGCATCCTTACATACATATCTGGGTGATGTTGAAGACACGCACCACAGGACGGCTTTCCTGGATGGTGGGACTGTGTTGAACCTTCCACTTTTCTATCTTCAAGGAGTTGTACTCTTTCCTGGGGCTACTCTTCCCTTGAGAGTTATTGAATCCAATTTTGTGGTGGCTGTTGAGAAATCCTTGAGCCGAGTTGATGTTCCTTACACCATTGGCGTGATCCGAGTTCACAGTGATACTGAACATCGTAGGATGAAATCTGCAAGCATTGGGACGACTGCAGAGATTCGACAGTACGGGCGCCTAGAAGATGGTTCCCTTAATTTGGTTACTCGTGGACAACAACGATTTCGCCTAAGACGGTGTTGGATTGACGTGGAAGGAGTGCCTTATGGAGAGGTCCAAATAATTGAGGAAGACATACCATCGCGAACTCCAAGGGATGCTTTTGGAAAATTAACACCCCTAAGTAATCTGCCTTGTAACCGTGCCGCCTCAAGCATGTTGTCATCCAAGTATTCTATTGATGGTCAGGGTTCCAAAAATGAGGAAAGTGATACAGAAGATAGCTTTGAGAATGAACTTTCACCAACAGCGAGAAGAATCCATCAGTCACTCATTCGTTCCAATTATGAATATGATGAATCAGCAAGCAGCGGTGATGATAAATTAACAGATGAGTCAGATCAGGAAATTAGATCTAATCTAGATGACCCAGACACCTTAATGCTAGCTGACCATGAAAAGTATGCAGAAAATATTGATTCTAGAGTTGGGAGCTGTTCCTCTTCTGGAAAACAGTCCTCCATCAGAGAAGGGCTTAATCGGTGTTATAAAAGTAAAGACCTCTACTCCTCACATAGAATTTCAAGAGCATTCTTGCCTGGTTGGGTGTATCGTATGTTTGACTCCTATTGGCTTGCACAAAGGGCTGCAGATATGTGGAAGCAAATCATTGGCGCGCCAAACATGGATGCCCTTGTTAAGAAGCCTGATGTTTTATCATTTTCTATTGCCTGTAAAATACCTGTATCTGAATCTACAAGGCAGGAGCTTTTGGATATTGATGGGATCTCATATAGATTGCGAAGAGAAATTGAACTACTAGAAAGCATTGATCTAATTCAATGTAAAATTTGTCAGATTATAATTGCAAAGCGGAGTGATGTGCTGGTGATGTCTAGTGAAGGTCCCGTTGGTACATATGTAAATTCAACTGGTTACGTGCATGAGATAACGACTTTGTTCAAAGCAAAAGGGTTAGCTCTTAAGGGGCCAGCATTTACAAAATACTGTTGGTTTCCGGGGTATGCATGGACAATTGCTAACTGTGCCACCTGTGAAACCCATATGGGGTGGCTTTTTACAGCCAGGAAGAGAAATCTGAAACCCAAGTCATTTTGGGGTATACGTAACTGTCAAGTTGCAGAAGAAATGCACTAA 1653 0.4338 MEEGNRRMLERERYQIEQILELDLEELQVEEVDEFHDSSDDDNNNNDHRDLTIGYGSAGVVPGEFTYNTCIASLHTYLGDVEDTHHRTAFLDGGTVLNLPLFYLQGVVLFPGATLPLRVIESNFVVAVEKSLSRVDVPYTIGVIRVHSDTEHRRMKSASIGTTAEIRQYGRLEDGSLNLVTRGQQRFRLRRCWIDVEGVPYGEVQIIEEDIPSRTPRDAFGKLTPLSNLPCNRAASSMLSSKYSIDGQGSKNEESDTEDSFENELSPTARRIHQSLIRSNYEYDESASSGDDKLTDESDQEIRSNLDDPDTLMLADHEKYAENIDSRVGSCSSSGKQSSIREGLNRCYKSKDLYSSHRISRAFLPGWVYRMFDSYWLAQRAADMWKQIIGAPNMDALVKKPDVLSFSIACKIPVSESTRQELLDIDGISYRLRREIELLESIDLIQCKICQIIIAKRSDVLVMSSEGPVGTYVNSTGYVHEITTLFKAKGLALKGPAFTKYCWFPGYAWTIANCATCETHMGWLFTARKRNLKPKSFWGIRNCQVAEEMH* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0810 550 PANTHER BNAA09G40760D PROTEIN 7 545 - -
Psa6g0810 550 Gene3D Peptide methionine sulfoxide reductase. 438 550 - -
Psa6g0810 550 ProSiteProfiles Lon N-terminal domain profile. 99 441 IPR003111 -
Psa6g0810 550 SMART lon_5 98 441 IPR003111 -
Psa6g0810 550 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 444 536 IPR004910 -
Psa6g0810 550 Gene3D - 79 207 IPR046336 -
Psa6g0810 550 PANTHER CEREBLON 7 545 - -
Psa6g0810 550 SUPERFAMILY PUA domain-like 98 440 IPR015947 -
Psa6g0810 550 MobiDBLite consensus disorder prediction 283 309 - -
Psa6g0810 550 Gene3D - 373 437 - -
Psa6g0810 550 CDD CRBN_C_like 455 541 IPR034750 -
Psa6g0810 550 MobiDBLite consensus disorder prediction 242 269 - -
Psa6g0810 550 ProSiteProfiles CULT domain profile. 442 549 IPR034750 -
Psa6g0810 550 MobiDBLite consensus disorder prediction 285 309 - -
Psa6g0810 550 Pfam ATP-dependent protease La (LON) substrate-binding domain 98 440 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0810 Psa-Chr6 28365223 28374991 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0810 K11793 - pop:7463779 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0810 6 28365223 28374991 Psa6g0810 6 28365223 28374991 ECH