Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0807 ATGTTCCTTCCATTCACACCATCCACATCACTCCTTTTTTACAACACCAAAACCATGGAGAAAACATCTCTTATATCTTTGGCTTCAACACCTAATGCAATTTTATTGCTTCTTGCTTTAACTATTTTCCAAGAAGTGCAAGGAATTGGTGTTAATTATGGCACAATAGCAGACAATCTTCCACCACCATCTCAAGTTGCAAAGTTTCTCTTACACTCCACCATAATTAACAAGGTGAGAATCTTTGATGCAAACCATGAAATCTTACATGCTTTTGCCGATACCGGAATCGAGATAACCGTAACAATACCTAATGACCAAATTCCAAACATAACCAACTTAACCTTAGCTCAACAATGGATCAAAACCAATGTCCAACCTTTTATCCCTTCAACCAACATCATAAGAATCCTAGTAGGAAATGAAGTCTTATCAACAGCTAACAAGCTTCTTATTACTAGCCTTGTCCCTGCCATGGAAACTCTACACCTTGCCCTTGTAATTGCTTCATTAGACAACTCTATTAAAGTGTCCACACCGCATTCTTTAGGTATTTTGTCTAACTCAAGTCCACCATCAAGTGCTAGTTTTAGACAAGGCTATGATATACATGTAATCAAGCCAATGCTTAGGTTTCTTAAAGATTCAAATTCTCCTTTCATGGTTAATCCTTACCCCTTTTTTGCTTGTACTTCAAGCAACCTAGATTTTGTGGTTTTTCGTGCAAATTCGGGGCTTTTTGATGATTACACTAAACTGAAATACACCAATATGTTTGATGCGCAACTTGATGCTGTTTATTCGGCAATGAAAGTTTTGGGCTTTGAGGACGTTGAAATTGTTATTGGCGAAACGGGTTGGCCTTCGATGGGCGACTCGGCCCAAATTGGTGTTGACACGAAGAGTGCTTCTGATTACAATGGGAATCTTATAAGGCGCGTTACTTCTGGGGAAGGGACACCTCTAATGCCGAATCGGACTTTTGATACCTATGTTTTTGGTTTGTTTAATGAAAATCTAAAGCCCGGTCCGATATACGAAAGGAATTTTGGACTGTTTTGGCCTAATATGAGTCTTGTCTATGATGTTCCAATAATGAGAAACAATGTAAGGGTTGCTAACAATCATTCTAAAGCTTTATTGTCAATAATGATAGCTTTGAACTTCTTGATAGGTTTTTGGGCATAA 1188 0.3813 MFLPFTPSTSLLFYNTKTMEKTSLISLASTPNAILLLLALTIFQEVQGIGVNYGTIADNLPPPSQVAKFLLHSTIINKVRIFDANHEILHAFADTGIEITVTIPNDQIPNITNLTLAQQWIKTNVQPFIPSTNIIRILVGNEVLSTANKLLITSLVPAMETLHLALVIASLDNSIKVSTPHSLGILSNSSPPSSASFRQGYDIHVIKPMLRFLKDSNSPFMVNPYPFFACTSSNLDFVVFRANSGLFDDYTKLKYTNMFDAQLDAVYSAMKVLGFEDVEIVIGETGWPSMGDSAQIGVDTKSASDYNGNLIRRVTSGEGTPLMPNRTFDTYVFGLFNENLKPGPIYERNFGLFWPNMSLVYDVPIMRNNVRVANNHSKALLSIMIALNFLIGFWA* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0807 395 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 41 371 IPR044965 GO:0004553|GO:0005975
Psa6g0807 395 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 41 371 - -
Psa6g0807 395 SUPERFAMILY (Trans)glycosidases 49 363 IPR017853 -
Psa6g0807 395 Pfam Glycosyl hydrolases family 17 49 363 IPR000490 GO:0004553|GO:0005975
Psa6g0807 395 ProSitePatterns Glycosyl hydrolases family 17 signature. 278 291 IPR000490 GO:0004553|GO:0005975
Psa6g0807 395 Gene3D Glycosidases 47 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0807 Psa-Chr6 28123497 28125810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0807 35 369 Miscellaneous Gene Families AT3G46570 55.621 4.17e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0807 - - ccaj:109788601 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0807 6 28123497 28125810 Psa6g0807 6 28123497 28125810 ECH