Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0806 ATGTCAAAGGCGGTGGCTTACATCCTACTAGCCACCGCCACAATAATTTTCTTCAAATTTATTTCTCCATTGAAACATGAAGAAGAAAAAGGTAGCCTTAGTAGAAGGTTCGGTTACAAAATATTAGAAAGAGCGCCAATTTTCGACCCTATTGTAACAAAGATTGAGAGAGAAGTAGAGCAAATAAAACAACAACAAAAGATGAATTTTGATAATAATAATAATAAGGTTGTTGTTCCTGATACGGGTTTGGAAAGTACAACCTCGATTAATGAGGTTGCGGAAACATATCAATTTCTTACCTCTGGTGGTAAGTTGAATACCACATTAAGGTTAATGATTTTGTTTCCTTTGTTAGATAGAGAAACCAAAGATGGTTTTATTGTTTCTAATGAGTTGGAAAGTTGGATTACTCAAAGAGCTTTGGAAAGATTGGATTATTCTACACAAACTGAATTGGAATCTAAGGATAAAGATGGTGATTCGTCTCTCTCGTTTAGAGAATATCTACCTCATTTATCTGAAGAAGATATAGAGAAAAATGAAACAACACATGGTGAAGCAGGATGGTGGATGAAGAAATTTGAAATTGCGGATTCTGATCATAATGGCCTTCTTAATTTCACAGAGCTTAGAGATTTTTTGCATCCAGAAGATAGCAAAAATCCAGAAATGTTGAAATGGATGGTTACAGATAGATTTAAGCGTATGGATAATCATGAAATGGATGGGAAATTAAGTTTCAATGAATTTGAAGAGAATGTATATAGTACATATGAAACCTATATGGATTTTGAAACCTATGGAGTTGATGTACCTAAAGTAACTGATAAATTTGCTGAGCTTGATGTGAATAAGGACCAATTTATAACACCTGAAGAATTGTTGCCTATACTTCCTTATATCTACCCTGGAGAGTTAGCCTTTGCTAAATATTATACATATTATTTGATGAATGAGGCGGATGATAATGAAGATAAGAAATTGACATTAGAGGAGATGATAAATCATGAATTTATTTTCTATAACACAGTTCATGCAGATGGTCATGCGGAAAGTGATGATGATCATGATGAGCTATGA 1083 0.3352 MSKAVAYILLATATIIFFKFISPLKHEEEKGSLSRRFGYKILERAPIFDPIVTKIEREVEQIKQQQKMNFDNNNNKVVVPDTGLESTTSINEVAETYQFLTSGGKLNTTLRLMILFPLLDRETKDGFIVSNELESWITQRALERLDYSTQTELESKDKDGDSSLSFREYLPHLSEEDIEKNETTHGEAGWWMKKFEIADSDHNGLLNFTELRDFLHPEDSKNPEMLKWMVTDRFKRMDNHEMDGKLSFNEFEENVYSTYETYMDFETYGVDVPKVTDKFAELDVNKDQFITPEELLPILPYIYPGELAFAKYYTYYLMNEADDNEDKKLTLEEMINHEFIFYNTVHADGHAESDDDHDEL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0806 360 Gene3D - 260 339 - -
Psa6g0806 360 Gene3D - 104 259 - -
Psa6g0806 360 PANTHER RETICULOCALBIN 1 360 - -
Psa6g0806 360 SUPERFAMILY EF-hand 109 172 IPR011992 -
Psa6g0806 360 ProSitePatterns EF-hand calcium-binding domain. 283 295 IPR018247 -
Psa6g0806 360 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Psa6g0806 360 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 360 - -
Psa6g0806 360 SMART efh_1 190 218 IPR002048 GO:0005509
Psa6g0806 360 SMART efh_1 274 302 IPR002048 GO:0005509
Psa6g0806 360 ProSiteProfiles EF-hand calcium-binding domain profile. 186 221 IPR002048 GO:0005509
Psa6g0806 360 SUPERFAMILY EF-hand 187 342 IPR011992 -
Psa6g0806 360 ProSiteProfiles EF-hand calcium-binding domain profile. 270 305 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0806 1 327 EF-hand Containing Proteins AT4G27790 38.739 1.71e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0806 K23901 - gmx:100806007 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0806 6 28114281 28115822 Psa6g0806 6 28114281 28115822 ECH