Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0792 ATGAGAGAAGAAACTGTTCAGGCAGATGCTTTGACTGTCGATCGCCTTGCTTCTTTGGAGAAGTATTCTGAAACAGCAGTAAAGCCCCGAGCTAAAATCTTGGCATTAGAAACGGAGTGGCTGAACTCTATCAAAGCTGACTTAGTGGTCTCTGATGTTGTTCCGGTTGCCTGTCGCGCCGCAGCAGATGCTGGCATTAGATCTGTCTGTGTGACCAATTTCAGTTGGGACTTCATCTATGCAGAGTATGTCATGGCTGCCGGACTTCATCATCGTTCAATAGTTTGGCAGATAGCTGAGGACTATTCCCATTGCGAGTTCCTTATTCGCCTCCCGGGATATTGTCCAATGCCGGCTTTTCGCGATGTTATTGATGTCCCTTTGGTGGTGAGGAGGCTGCACAAATCTGCAAAAGAGGTGAGGAAGGAGCTTAATGTACCAGAAAATGTGAAGCTAGTTATTCTCAACTTCGGCGGGCAGCCATCAGGATGGAAGTTGAAGGAGGATTTTTTACCGCCTGGCTGGTTGTGCCTGGTTTGTGGTGCTTCTGAGAATGAGGACCTACCACCGAATTTTAGAACATTGCCTAAAGATGCTATAACGCCCGACATTATTGCAGCATGTGACTGTATGCTTGTGAAGCCTTGGCATCAAGTGTCCCTTTGTCTTTGTAAGAAGAGATTATTTCAACGAAGAGCCATTTTTGAGAAATATGCGTTGAGAAGAGATTTAATCACCGGTCATTGGAGGCCTTATCTTGAACGTGCTATAAGTTTGAAACCCTGCTATGAAGCAGGCATTAATGGTGGCGAGGTAGCAGCTCACATCCTTCAGGAGACGGCTTTTGAAAAAATTATGCATCGTGATAAGTTCTTGGTTATCACTCCAAAGAGCTCCCGCCGAGATATTGCAATCCCTGAATGGTATGCTACAGCCGAAGACCAACTTGGCCAGTCATTACCTATTTCTCCTCTGGATAATAGCGGCTTTACATCCCATTCGGGAGTTGAAGACTTTGACATTCTTCATGGAGATGTCCAAGGTCTTCCAGATACTGTGGCGTTCTTACAGAGCCTATCCGAGTTGGTTGAAAAACACACAAGGCGAGAGCGCAAGGCTGCGGCTAATCTCTTCATTGGGAGAGCTCCGGGAAGGTTAGATGTAATGGGCGGTATTGCTGATTATTCTGGTAGCCTTGTCCTGCAGATGCCAATTAGAGAAGCCTGTCACGTTGCTTTGCAAAGAGTTCATCCGAGTAAGCATAGACTTTGGAAACATGCCGAGGCCAGACAGAATGACAAAGGCGGGGATCCAACTGCTGTCTTGCAAATTGTATCATACGGCTCGGAGTTAGGCAACCGCGGTCCTACGTTTGACATGGATTTGTCTGATTTCATGGATGGAGACAAGCCAATCTCATATAAGAAAGCAAGAAAATACTTTGCTTCAGATCCATCGCAAAAGTCGGTAACACAAATGCGTTTCATCCGCGGTCCAGAAGGGAAAGGTGTATCATCTTCTGCATCCGTCGAGGTCGCTAGTATGGCTGCTATTGCAGCAGCTCACGGATTAAATATCAGCTCAAGGGATCTGGCTTTGCTCTGCCAGAAGGTTAGACTATACTCACGGATTCGCTATGCTGTCGTATATGCATGTCGAAAATCACATTGTCGGAGCTCCATGCGGTGTCATGACCAGATGGCTTCAGCATGTGGTGAAGCTAACAAACTTCTAGCTATGATTTGCCAGCCTGCAGAAATTGTCGGCCTCGTCGAAATTCCAAGTCATATCCGGGTTTGGGGAATTGATTCTGGAATAAGACACAGTGTTGGAGGTGCAGATTATGGATCTGTCAGAATCGGGGCTTTTATGGGTATGAAGATGATAAAGTCAAGGGCTTCTCAGGAATTGACTGAGATGTGTGCCGCAAATGGGTTGAATTCCGATGAAGTTGAACAAGATGACATCGAGCTACTTAAACAAGAAACCTCCTTAGATTACTTATGCAATTTAATGCCTCACAGATTTGAGGCTCTTTACGCCAAGACGATACCCGAGTCCGTTGATGGTGAGACATTTTTGAAGAAATATACAAACCATAACGATCCTGTCACTGTTATTGATGAGAAGTGTAATTACGGAGTGAGAGCTCCCACAATACATCCTATCTATGAAAATTTCCGAGTCAAGACCTTCAAAGCACTTCTGACATCAGCAAGTTCAGCCGATCAACTCACAACCTTAGGAGAATTGCTATATCAGTGCCACTACAGCTATAGTGCTTGTGGACTTGGCTCCGATGGAACAGATAGGCTTGTACACTTGGTACAAGAATTGCAGCATAGTGCAGCGTCCAAATCCGAAGGCGGTACATTGTTTGGCGCCAAGATCACTGGCGGGGGTTCGGGTGGAACAGTTTGCGTAATCGGTAGAAATTGTCTCAAGAGCAGTGAACAAATTTTCGAGATTCAGCAGAGGTACAAAAAAGCTACTGGTTACTTGCCGTTTATTTTCGAGGGATCGTCGCCAGGTGCGGGAAAGTTCGGCTACCTGAAGATTCTCCGGCGAGCTACTCCGAAGAAAGTTGACAGCTATGGTGATTTTAATGCAGTCTTGACAGAGAATGAAAGCTGA 2634 0.4582 MREETVQADALTVDRLASLEKYSETAVKPRAKILALETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSAKEVRKELNVPENVKLVILNFGGQPSGWKLKEDFLPPGWLCLVCGASENEDLPPNFRTLPKDAITPDIIAACDCMLVKPWHQVSLCLCKKRLFQRRAIFEKYALRRDLITGHWRPYLERAISLKPCYEAGINGGEVAAHILQETAFEKIMHRDKFLVITPKSSRRDIAIPEWYATAEDQLGQSLPISPLDNSGFTSHSGVEDFDILHGDVQGLPDTVAFLQSLSELVEKHTRRERKAAANLFIGRAPGRLDVMGGIADYSGSLVLQMPIREACHVALQRVHPSKHRLWKHAEARQNDKGGDPTAVLQIVSYGSELGNRGPTFDMDLSDFMDGDKPISYKKARKYFASDPSQKSVTQMRFIRGPEGKGVSSSASVEVASMAAIAAAHGLNISSRDLALLCQKVRLYSRIRYAVVYACRKSHCRSSMRCHDQMASACGEANKLLAMICQPAEIVGLVEIPSHIRVWGIDSGIRHSVGGADYGSVRIGAFMGMKMIKSRASQELTEMCAANGLNSDEVEQDDIELLKQETSLDYLCNLMPHRFEALYAKTIPESVDGETFLKKYTNHNDPVTVIDEKCNYGVRAPTIHPIYENFRVKTFKALLTSASSADQLTTLGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSAASKSEGGTLFGAKITGGGSGGTVCVIGRNCLKSSEQIFEIQQRYKKATGYLPFIFEGSSPGAGKFGYLKILRRATPKKVDSYGDFNAVLTENES* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0792 877 Pfam GHMP kinases C terminal 744 825 IPR013750 -
Psa6g0792 877 Gene3D - 708 832 IPR036554 -
Psa6g0792 877 Pfam Galactokinase galactose-binding signature 376 414 IPR019539 -
Psa6g0792 877 SUPERFAMILY Ribosomal protein S5 domain 2-like 375 539 IPR020568 -
Psa6g0792 877 PRINTS Mevalonate kinase family signature 382 406 - -
Psa6g0792 877 PRINTS Mevalonate kinase family signature 496 518 - -
Psa6g0792 877 PRINTS Mevalonate kinase family signature 794 811 - -
Psa6g0792 877 SUPERFAMILY GHMP Kinase, C-terminal domain 598 847 IPR036554 -
Psa6g0792 877 Gene3D - 354 599 IPR014721 -
Psa6g0792 877 PANTHER L-ARABINOKINASE 5 854 - -
Psa6g0792 877 PANTHER MEVALONATE KINASE/GALACTOKINASE 5 854 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0792 K12446 - gmx:100306164 1301.19