Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0787 ATGGCATTCAGAATTAGGGTTTCGTGCATAGCGAGAAAGAGTTACAGAAGAACACCACACAATTTCTTCTTCCGTCAACACTCCAATTCATCTTCAACTTCGAATTCGAATCCTCTTCTCCTCAAATTGCTTCACCTCCCAGATTCACGCATCAAAACGACGCTGGGTCATGAATTTCCCTCCCTTCCCACCTCGCTACTTTCATTGGACTTTCTTATCACCTCTCTATCCCCTTCTTCTTCTCAAAAACAAAACTTGGTTTTGGAATGGATTCTGGAGAAATCGCTAAAACAAAATGTAAAAGATCATAGTTTTTTCTCTGATCTCATCTTTCTATGTGGAAAGGCGAAGAATGTGAAACTAGGGATGCATGTTTTTAGTTCTATGGAAGCTGTTGGAGTTAAACCGACGAGGAATGTTGATGCCATATTAGCTTGGTACTCGGTTAAGAAGGCTGCTGGACTTGGTTCTGATCTTCGAATGTTTGAATTGGTTTTGACGGGTTGTGTTTATTCAAAAAAGTTTGAGATTGCTGATACAGTTTTTGAAGAAATGATGGTTTCTGAAATTATACCCAATGGAACCATACTCGAAAGTATGCTTAAAGGGCGTTGTGAGCAAAAGAGTTTATGTCGGGTGGAGGAGTTTGTTAAGCTTGTGCTAGATAACAGATGGGAAATCAGTGGAACCATGGTTGAGATGTTGATAGCATTGTATCACGAACTAGAGCGAGTGGAAAAGATGGAGGAGTTACTTGAAACGATGACAAAGTATCTGGTTGATTCTGGTGTCCTCTTGCAAATTCATTGTGGGATTTTAAGGATGTATGCCGTGTTAGATAGATTGGACGGTGTAGAGTTATCTGTTGGTAGAATGTTGAAACAAGGGATGTCGTTCGCAAGTTCAGATGATGTTGAAAAGGTTATCTGCTCATACTTTAGGAAGGAAGCTTATGATAGGTTAGACATATTCTTGGAATGTATAAAGAATTCTTATGTGCTTACGAGATCAACTTTCGATTTGTTGATATCTGGTTATAGAAGAGCAAACTTGCATGAAAAGGTTGATTTAGTGTTGTTGGACATGAAATCAGTGGGATTAGCATAA 1107 0.3911 MAFRIRVSCIARKSYRRTPHNFFFRQHSNSSSTSNSNPLLLKLLHLPDSRIKTTLGHEFPSLPTSLLSLDFLITSLSPSSSQKQNLVLEWILEKSLKQNVKDHSFFSDLIFLCGKAKNVKLGMHVFSSMEAVGVKPTRNVDAILAWYSVKKAAGLGSDLRMFELVLTGCVYSKKFEIADTVFEEMMVSEIIPNGTILESMLKGRCEQKSLCRVEEFVKLVLDNRWEISGTMVEMLIALYHELERVEKMEELLETMTKYLVDSGVLLQIHCGILRMYAVLDRLDGVELSVGRMLKQGMSFASSDDVEKVICSYFRKEAYDRLDIFLECIKNSYVLTRSTFDLLISGYRRANLHEKVDLVLLDMKSVGLA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0787 368 Gene3D Tetratricopeptide repeat domain 65 320 IPR011990 GO:0005515
Psa6g0787 368 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 22 140 - -
Psa6g0787 368 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 138 367 - -
Psa6g0787 368 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 138 367 - -
Psa6g0787 368 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 22 140 - -
Psa6g0787 368 Pfam PPR repeat 338 366 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0787 Psa-Chr6 27469780 27471832 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0787 - - ccaj:109813006 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0787 6 27469780 27471832 Psa6g0787 6 27469780 27471832 ECH