Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0783 ATGGACTCCTACCTAAGAGAATTAGAAGGAAAACAAGCAAATGATCCTTTATTCATAGAGAATATGAACAAAAACAATTCAACTTCTTCAAATGAAAGATGTTTATGGATTCCAGGTCCATTGATAGTAGGAGCTGGACCTTCCGGACTCGCAGTAGCAGCATACCTAAAACAAAAAGGTGTTCCAAGTTTAATACTAGAAAGATCAAACTGCATAGCTTCACTATGGAAGCTAAAAACCTACGACCGACTTCGTCTTCATTTACCGAAACAAGTTTGTGAGCTTCCATTAATGAAATTCCCTTCTGGTTTCCCAACATATCCAACAAAACAACAGTTTATAGAGTATTTGGAAAGTTACTCGGAGAAATTCGATATTAGGCCTTGGTTCAATGAGACAGTGAAACATGCTGAGTTTGATGCTACACTTGGTTTTTGGAGGGTGAGGAGTGAGGGAAAAGGAGGGATGATTACGGAGTTTGTTTGTCGGTGGTTGATCGTTGCGACGGGGGAGAATGCGGAGGCGGTGGTGCCGGAGATGGAAGGAGTTGGTGAGTTTGGTGGTAGTATTAAGCATACTAGTTTGTATAAAAGTGGTGAAGAATTTAGAGGGAAGAAAGTTTTGGTTGTTGGATGTGGGAATTCTGGTATGGAAATTTGTTTGGATCTTTGTAATCATGATGCTGCTCCTTCTATTGTCGTTAGAGATTCGGTACACATCCTACCAAGAGATATGCTGGGAAAATCAACTTTTGGGCTGTCCATGTGGTTGCTCAAGTGGCTGCCTATGCAGCTTGTGGATTGCATCCTTCTCATCATGTCTTGGCTATTGCTCGGCGACACGGCGCGATTCGGTTTGGTTCGGCCCCGCGAGGGACCCCTTGAACTCAAAAAATTGTCTGGAAAGACACCAGTCCTAGATGTGGGTGCCCTTGCCAAGATCAAAAGAGGAGACATTAAGGTATGTTCAGGAATCAAGAGGTTAAAACGCTACACAGTGGAATTTGTTGATGGAAAGATAGAAAATTTTGATGCCATTGTATTAGCAACTGGTTACAAAAGTAATGTACCTTATTGGCTAAAGGATAAGGATATGTTCTCTAAGAAAGATGGATACCCTATGAAGCCATTTCCTAATGGATGGAAAGGTGAAAATGGCCTCTATGCTGTTGGTTTCACCAAACGTGGACTTCTTGGTGCATCCATGGATGCAAAAAATATAGCTCAAGATATTGAATGGTGTTGGAAATCTGAGGCAAAGCATACTTTGGCTTTTGCTCTATTGCCACAATCCAAGTCATGA 1302 0.4171 MDSYLRELEGKQANDPLFIENMNKNNSTSSNERCLWIPGPLIVGAGPSGLAVAAYLKQKGVPSLILERSNCIASLWKLKTYDRLRLHLPKQVCELPLMKFPSGFPTYPTKQQFIEYLESYSEKFDIRPWFNETVKHAEFDATLGFWRVRSEGKGGMITEFVCRWLIVATGENAEAVVPEMEGVGEFGGSIKHTSLYKSGEEFRGKKVLVVGCGNSGMEICLDLCNHDAAPSIVVRDSVHILPRDMLGKSTFGLSMWLLKWLPMQLVDCILLIMSWLLLGDTARFGLVRPREGPLELKKLSGKTPVLDVGALAKIKRGDIKVCSGIKRLKRYTVEFVDGKIENFDAIVLATGYKSNVPYWLKDKDMFSKKDGYPMKPFPNGWKGENGLYAVGFTKRGLLGASMDAKNIAQDIEWCWKSEAKHTLAFALLPQSKS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0783 433 Pfam Flavin-binding monooxygenase-like 42 359 IPR020946 GO:0004499|GO:0050660|GO:0050661
Psa6g0783 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Psa6g0783 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Psa6g0783 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Psa6g0783 433 SUPERFAMILY FAD/NAD(P)-binding domain 41 238 IPR036188 -
Psa6g0783 433 Gene3D - 40 419 IPR036188 -
Psa6g0783 433 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 28 422 - -
Psa6g0783 433 SUPERFAMILY FAD/NAD(P)-binding domain 204 412 IPR036188 -
Psa6g0783 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Psa6g0783 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 226 - -
Psa6g0783 433 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 28 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0783 Psa-Chr6 27407093 27411261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0783 K11816 - gmx:100804746 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0783 6 27407093 27411261 Psa6g0783 6 27407093 27411261 ECH