Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0750 ATGGAGTTCGTTCTTCGCTTTAGTTCATGCATGCCGACGCTCTTCAGATTTTGTTTTAAGCTTCGATTCGCCATAGTCGTTTTTGAGATTGTATTGATATTGGCGTGGTTGGAAATCAATGATGCGAAGACCCAAGAACGACAATTTCAATGGGGAGGATTGGAAGAGAGGGTTGAGAAAATTGCTTCACACTCTTGCATACATGACCAGATACTTGAACAGAGAAAGCGACCTGGTCACAAGGTGTATTCGGTTACCCCACAAGTTTATGAGCCTGGTCAATTGAAATCCCTTCAGCATAGAGGCAGGGCGTTACTTGATGTATTATCAACATCATCAAAGCCCCAAAAAGATGAAAAGCAACCTATTAGGATATATCTAAATTATGACGCTGTTGGTCACTCCCCTGACAGGGATTGTCAAAAAGTTGGTGACATTGTTAAGCTCGGGGAGCCTCCGATTAATGCTATTCATGGATTGCCCTCTTGCAATCCTCTTTCTAATCCTCCAATCTTCGGTGATTGTTGGTATAACTGTACTTCTGAAGATATATCAGGAGAGGATAAAAAGCACCGCCTTCGCAAGGCGTTAGGTCAGACAGCTGACTGGTTTAGGCGAGCATTAGCTGTTGAGCCTGTCAAGGGGAACTTGCGATTGAGTGGATATTCTGCATGTGGACAAGACGGAGGTGTGCAGCTTCCTCGTGGATATGTTGAAGAGGGAGTCTCTGATGCCGACTTAGTTCTTTTGGTGACTACAAGACCTACAACTGGGAATACACTTGCTTGGGCAGTAGCATGTGAACGAGATCAATGGGGCCGTGCTATAGCTGGACATGTTAATGTTGCTCCTCGTCATTTGACAGCTGAGGCAGAGACTTTGCTATCAGCTACTCTGATACACGAGGTTATACATGTTCTTGGTTTCGATCCTCATGCCTTCACTCATTTTAGAGATGAAAGGAGAAGACGTCGTAATAAGGTTACCGAACAAGTGATGGATGAAAAGATTGGGCGAATAGTAACGCGTGTGGTGCTTCCACGTGTTGTCATGCATTCTCGACATCATTATGCGGCGTTCTCAGGAAATTTTACTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGAACATCAGGGTCTCATTGGGAAAAAAGGCTTCTGATGAATGAGATCATGACGGGTTCTGTGGACACAAGATCCGTTGTTTCAAAAATGACACTAGCTCTCTTAGAAGACAGCGGATGGTACAAAGCTAATTATAGCATGGCAGACCGTCTTGATTGGGGTCGCAACCAAGGCACTGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAGGGAGCTTATCATTGCAACTCAACACAGATTTCAGGTTGTACGTATAACAGAGAGGCAGAGGGTTACTGTCCCATTCTAACCTATAGCGGAGATCTTCCTCAGTGGGCTCAGTATTTTCAACAAGCTAATAAAGGTGGACAGTCTTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACTAACAGTGCACGGGCACCTGATAGAATGCTAGGTGAAGTCCGAGGAAGCAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGAGGTTCTATGACCCAAGGAAATGGTTGTTATCAGCACAGGTGTATCAACAACACTTTAGAGGTTGCTGTGGATGGTATGTGGAGAGTGTGTCCTCTGGCTGGCGGATCCATTCAATTTGCTGGCTTTAATGGTGCATTGATCTGTCCTGCATATTACGAGCTCTGTAACACAGACTCAGTGGTTGACTCGAGGAAATGTCCTAATGCATGCAATTCCAATGGAGATTGTGTTGATGGAATTTGCCACTGCTTTCTTGGATTTCATGGCCACGATTGCAGTAGACGTTCCTGCCCCGGAAATTGCACTGGCAATGGCTTGTGTCTCAACAACGGAATATGTGAATGTAAACCCGGTTACACTGGCATTGACTGTTCCACGGCTGTTTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAACTTGTGAATTCCGCTGTTCTGACTATGGGAAATACACCTGCCAGAACAGCTCCACGCTCCTCTCAACTCTCTCAGTTTGCAAAAATGTGCTAGGAAATGACATTTCTGGGCAGCATTGTGCACCCAGAGAACCTAGCATACTGCAGCAGCTGGAAGAAGTGGTTGTCATGCCCAACTACCACCGATTGTTCCCTGGTGGTGCTAGAAAATTATTTAATATATTTGGCAGCACCTACTGTGACGAGGCAGCTAAACGGCTTGCTTGCTGGATCTCAATCCAGAAGTGTGATGGAGACAACAGGCTACGAGTATGTCATTCTGCATGCCAATCATATAATCTAGCGTGTGGAGTTTCATTGGACTGCAGGGACCAAACTCTTTTCAGCAAGGAGGAGGGGGAGGGTCAGTGTACCGGTTCTGGTGAGATGAAATTGTCATGGTTTAATCGATTGAGAAGCAGTTTTACTTTGAGAAATAGTTCCTCAAATGAAATATTTGTAAGAAACAGGCAGCTTTAG 2583 0.4514 MEFVLRFSSCMPTLFRFCFKLRFAIVVFEIVLILAWLEINDAKTQERQFQWGGLEERVEKIASHSCIHDQILEQRKRPGHKVYSVTPQVYEPGQLKSLQHRGRALLDVLSTSSKPQKDEKQPIRIYLNYDAVGHSPDRDCQKVGDIVKLGEPPINAIHGLPSCNPLSNPPIFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVIHVLGFDPHAFTHFRDERRRRRNKVTEQVMDEKIGRIVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNSTQISGCTYNREAEGYCPILTYSGDLPQWAQYFQQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNTLEVAVDGMWRVCPLAGGSIQFAGFNGALICPAYYELCNTDSVVDSRKCPNACNSNGDCVDGICHCFLGFHGHDCSRRSCPGNCTGNGLCLNNGICECKPGYTGIDCSTAVCDEQCSLHGGVCDNGTCEFRCSDYGKYTCQNSSTLLSTLSVCKNVLGNDISGQHCAPREPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCDGDNRLRVCHSACQSYNLACGVSLDCRDQTLFSKEEGEGQCTGSGEMKLSWFNRLRSSFTLRNSSSNEIFVRNRQL* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0750 860 Gene3D Leishmanolysin domain 4 505 600 - -
Psa6g0750 860 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 1 832 - -
Psa6g0750 860 Pfam Leishmanolysin 177 602 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Psa6g0750 860 PRINTS Leishmanolysin (M8) metalloprotease family signature 251 280 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Psa6g0750 860 PRINTS Leishmanolysin (M8) metalloprotease family signature 404 433 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Psa6g0750 860 Gene3D - 116 306 - -
Psa6g0750 860 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 1 832 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Psa6g0750 860 Gene3D Leishmanolysin domain 3 444 503 - -
Psa6g0750 860 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 117 603 - -
Psa6g0750 860 Gene3D Leishmanolysin , domain 2 316 441 - -
Psa6g0750 860 ProSiteProfiles EGF-like domain profile. 638 670 IPR000742 -
Psa6g0750 860 ProSitePatterns EGF-like domain signature 1. 658 669 IPR000742 -
Psa6g0750 860 ProSitePatterns EGF-like domain signature 2. 658 669 IPR000742 -
Psa6g0750 860 Gene3D Laminin 641 672 - -
Psa6g0750 860 Gene3D Laminin 610 639 - -
Psa6g0750 860 Pfam EGF-like domain 642 669 IPR013111 -
Psa6g0750 860 SMART egf_5 641 670 IPR000742 -
Psa6g0750 860 SMART egf_5 610 638 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0750 Psa-Chr6 26529789 26537677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0750 K01404 - gmx:100808350 1552.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0750 6 26529789 26537677 Psa6g0750 6 26529789 26537677 ECH