Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0749 ATGGCTCTAAATTCAAACTCAAAACCCTTTCTTCTCTTCAACATGATCTTACAATTAGGTTATTTAGCATCTGCTGCTGTGTTTACCATACAAAATCAATGCAGTTACACAATTTGGCCGGGAACACTTTCCGGCAACGGCGCAGCCGTTCTCGGTAAAGGTGGTTTTTCGTTAGCCCCCGGTGCAATCGTTAACCTAACTGCACCGTCGGGCTGGTCCGGACGTTTCTGGGCTCGGACCGGTTGTAAATTCGACGGTGCAGGCAATGGACGATGTATCACCGGAAATTGTCTCGGTGGACTAAATTGCATAGGAGGAGGTACTCCACCAGTGACATTGGCGGAATTCACTATCGGATCAGCCGGAAACGGCGGTAAGGATTTCTACGACGTGAGTCTGGTGGACGGTTACAATGTGGGAATGGGCATATGGGCAAACGGAGGAACCGGTGACTGTCAATACGCGGGGTGTGTTGCGGATTTGAATGGTAATTGTCCGACGGAACTTAGGGTGAGTGGCGGTGGTGGCTCCGGGTCGGTTGTGGCGTGTAAGAGCGCGTGTTTGGCGTTTAATACGGAGGAATTTTGTTGCACCGGTGAACACTCGACGCCGGAGACATGTTCGCCGACACGTTACTCGGAGATATTTAAGAAAGCGTGTCCAACTGCATACAGTTATGCTTATGATGATGCTTCAAGCACTTGCACATGTTCTGGTTCTAGATACCTTATCACGTTTTGCCCTAGAGGATCATCGTGA 759 0.4967 MALNSNSKPFLLFNMILQLGYLASAAVFTIQNQCSYTIWPGTLSGNGAAVLGKGGFSLAPGAIVNLTAPSGWSGRFWARTGCKFDGAGNGRCITGNCLGGLNCIGGGTPPVTLAEFTIGSAGNGGKDFYDVSLVDGYNVGMGIWANGGTGDCQYAGCVADLNGNCPTELRVSGGGGSGSVVACKSACLAFNTEEFCCTGEHSTPETCSPTRYSEIFKKACPTAYSYAYDDASSTCTCSGSRYLITFCPRGSS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0749 252 Pfam Thaumatin family 32 248 IPR001938 -
Psa6g0749 252 SMART tha2 28 248 IPR001938 -
Psa6g0749 252 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
Psa6g0749 252 PANTHER OS03G0233200 PROTEIN 23 248 IPR001938 -
Psa6g0749 252 PANTHER PATHOGENESIS-RELATED PROTEIN 5 23 248 - -
Psa6g0749 252 CDD TLP-PA 27 247 - -
Psa6g0749 252 ProSiteProfiles Thaumatin family profile. 25 250 IPR001938 -
Psa6g0749 252 PIRSF PR5 2 252 IPR001938 -
Psa6g0749 252 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Psa6g0749 252 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Psa6g0749 252 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Psa6g0749 252 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Psa6g0749 252 Gene3D Thaumatin 26 248 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0749 Psa-Chr6 26524752 26525938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0749 10 252 Receptor kinase-like Gene Family AT5G38280 43.952 8.27e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0749 - - gmx:100809378 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0749 6 26524752 26525938 Psa6g0749 6 26524752 26525938 ECH