Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0704 ATGGCTACTACTCTTTCTGAAGCATATAGAGATCATCCTCTTCACCTCCATCATATTATTCCATTAGACTTTTCTTCATTTAGAACTTTACCTGATTCACATGCATGGCCTCAATCTAAAGATGATAATGATCATTTAACATCCAATGGATCATGCATACCCATCATTGATCTCAATGATCCTAATGCAATGGAACAAATAGGCCTTGCATGTGAGAAGTGGGGTGCCTTCCAATTGAAGAACCATGGAGTACCCTTAAATTTAATTGAAGAGGTTGAAGAAGAAGCAAAGAAACTCTTTTCTCTTCCTTCTAAAGAGAAAATTAAGGCATTAAGATCGGCCGGCGGCGCAACCGGATACGGCAGAGCTCGAATATCACCGTTCTTCCCTAAATATATGTGGCATGAAGGATTCACAATCATGGGGTCACCGTCTAATGATGTCAAAAAGATCTGGCCTAATGACTACGAATATTTTTGTGACATAATGGAAGACTATCAAAAGCAAATGAAGACACTAGCAGAGAAAATAACAAACATAATATTCAACATATTAGGAATTTCCAAAGAACAAAACAAATGGGTTGGTTCAAACAACCATTGTGAAGCACTTCAACTAAACTTCTACCCATGTTGTCCAGATCCAAAAAAAGCAATGGGACTAGCTCCACACACAGACACATCACTTTTCACAATCCTCCATCAAAGTCAAACAAGTGGACTTCAAATATTCAAAGAAGGTGTAGGGTATGTTACTGTGGACCCTCATCCAAATACATTAGTTGTTAACACTGGTGACATTCTTCATATATTGTCAAATTCAAGGTTTCGATGTTCTCTTCATCGTGCTGTTGTGAATGATGTTAAGGATAGATATTCTGTGGCTTATTTTTATGGACCTCCGGTTGATTATTTGGTTTCTCCTTTGGTTGTTGATGGTTCTTTGCCACGGTTTCGATCTTTGAGTGTTAAGGATTATATTGGGATTAAAGCCAAGAATTTAGGAGGTGCTTTGTCTTTGATTAGTACTTTACTTGATCACGATGACTAA 1050 0.3771 MATTLSEAYRDHPLHLHHIIPLDFSSFRTLPDSHAWPQSKDDNDHLTSNGSCIPIIDLNDPNAMEQIGLACEKWGAFQLKNHGVPLNLIEEVEEEAKKLFSLPSKEKIKALRSAGGATGYGRARISPFFPKYMWHEGFTIMGSPSNDVKKIWPNDYEYFCDIMEDYQKQMKTLAEKITNIIFNILGISKEQNKWVGSNNHCEALQLNFYPCCPDPKKAMGLAPHTDTSLFTILHQSQTSGLQIFKEGVGYVTVDPHPNTLVVNTGDILHILSNSRFRCSLHRAVVNDVKDRYSVAYFYGPPVDYLVSPLVVDGSLPRFRSLSVKDYIGIKAKNLGGALSLISTLLDHDD* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0704 349 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 199 300 IPR005123 -
Psa6g0704 349 SUPERFAMILY Clavaminate synthase-like 17 334 - -
Psa6g0704 349 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Psa6g0704 349 Pfam 2OG-Fe(II) oxygenase superfamily 202 300 IPR044861 -
Psa6g0704 349 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 337 - -
Psa6g0704 349 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 337 - -
Psa6g0704 349 Gene3D - 17 328 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0704 Psa-Chr6 24348659 24351126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0704 53 337 Glycosyltransferase AT5G59530 29.808 2.01e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0704 K04124 - gmx:100808546 539.265