Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0703 ATGGGTAGTGAGAATGAAATGATCCCATGTTTGGATTTTTCAGGAGTTGGTGATGATGATGAAGGGAGTGAGGAATGGGAGAAAATGAGTAAGAAAGTGAGAGAAGCATTAGAGAGTTATGGTTGTTTTATCTTAATGTATGATAAGAACAAGATTCCAAAGAGTTTGTGTGAGAACATGTTACTAGGAATGAAAGAGTTGTTTGATTTACCAGAAGAGATTAAGAAGAAGCACATAAGTACTAGGCCTTACAGCAGCTACAAAGGTGATTGTCCTAAGTTTCCGCTAACACAAACTGAGACAATGAAGTCCTTGAGCTCCAAGATGCATGAACTGAATTTTCTTATTCTGAAGATGATTAAAGATAGTTATGGTCTTCCAAAACAATACTATTCAGATATTGAAGTCTTGAAGAATACGAGTCATTTACGATTGATGAAGTACAAAACTCCTAAAACGACCAAAGATTGTGAAACAGCTCTGTTACCACATACCGACAAAAGTACCTTAACCATGTTGTACCAAAACGAAGTCCAAGGTTTACATGTTCAAACCAAAACAAATAAATGGATTCAATTGAACATACCCCAAGAAGGTTTCATTGTCATAGTTGGTGACATACTCAAGGCATGGAGTAATGGAAGACTTCACGCACCTCCACACAAAGTGATGATGTGTGGAGACAAAGAAAGATACTCATTTGCTGAATTTACACTGCCAAAAGAAGATGTGAAAATTGAGGTACCACGTGAATTGGTGGATGATGAAGTGCATCCTCTACGTTATCGTTCATTCACTTATGGAGATTACTTAGAGTACTTCGTTTCAACACTTAAGGAAAATGCACTAGAAGCATACGTAGGTGTTTGA 870 0.3713 MGSENEMIPCLDFSGVGDDDEGSEEWEKMSKKVREALESYGCFILMYDKNKIPKSLCENMLLGMKELFDLPEEIKKKHISTRPYSSYKGDCPKFPLTQTETMKSLSSKMHELNFLILKMIKDSYGLPKQYYSDIEVLKNTSHLRLMKYKTPKTTKDCETALLPHTDKSTLTMLYQNEVQGLHVQTKTNKWIQLNIPQEGFIVIVGDILKAWSNGRLHAPPHKVMMCGDKERYSFAEFTLPKEDVKIEVPRELVDDEVHPLRYRSFTYGDYLEYFVSTLKENALEAYVGV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0703 289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 139 240 IPR005123 -
Psa6g0703 289 Pfam 2OG-Fe(II) oxygenase superfamily 143 238 IPR044861 -
Psa6g0703 289 SUPERFAMILY Clavaminate synthase-like 8 277 - -
Psa6g0703 289 Gene3D - 5 286 IPR027443 -
Psa6g0703 289 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 88 IPR026992 -
Psa6g0703 289 PRINTS Isopenicillin N synthase signature 164 185 - -
Psa6g0703 289 PRINTS Isopenicillin N synthase signature 200 226 - -
Psa6g0703 289 PRINTS Isopenicillin N synthase signature 266 284 - -
Psa6g0703 289 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 99 - -
Psa6g0703 289 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 99 287 - -
Psa6g0703 289 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 4 99 - -
Psa6g0703 289 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 99 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0703 Psa-Chr6 24332917 24334726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0703 8 274 Glycosyltransferase AT5G59530 24.585 3.94e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0703 - - gmx:100817159 336.65