Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0686 ATGCGACGCACTCCGACTACGAATTTCCTTGCCGCCACCGACGCCTCCTTCTCCACCGCCGAAATGTCTTCACGTCCTTATCACCGAGGTCACCGTAGAGGATACTCCGGCCGCTCGTATTCCGGCGGTAGAGACCAGTTCGTTACTGGAGACGATCACTTACAGTCAGTCCGCGACGCCAATTCGGCAATCCGGCAAGGAGAGAGAAGAAGCTCTGCGAACCAAACGCAGTACTATCAGAATCCACCTCACGATCCTAGGTTTCGTCCGCCACTGTTTTATTATCAGAATCCACCTTACAATGCTCATCCACCGCCTCAATATCAGAATCAGTCTTTCAATCCAAGGCCTCATCTACCGCCTCAGTATCAGAATCAGTCATACAATCCAAGGCCTCGTCCTTATCCTCATCAGCCGCCGCACTTTCGGCAGCCGTATGATCACCGACGTGAATTTCGTCCGCCACAGAATTTTCGCCCAAAGCCTCAGGATCATCGAGAGTGGGAGCTTGCTTTGACGCCGGCACCTCCTCATTGTGAAAGGTTTAAAGTCCTTTCCTATAATATATTGGCCGATTACCTTGCTATGGACCACTGGAGAAAACTTTATTATCACATACCTTCTTACATGTTGGACTGGAAGTGGAGAAAGAGTAAAATTATTTCTGAGCTTGGCTTGTGGTCTGCCGATATCATGTGTTTTCAGGAGGTTGATAAATTTGATGAGTTGGTGGAGGATTTAAAGTTTAAAGGATACAGAGGCATCTGGAAGATGCGTACGGGCAATCCAGTTGATGGTTGTGCAATCTTTTGGCGAACATCAAGGTGCAATTTGTTATATGAAGAAAGCATAGAGTTCAATAAGTTGGGTCTTAGAGACAATGTTGCTCAAATATGTGTACTAGAGTTCATTAATCAAAATGGATCTCTCCCACCCAGCTTGACAGGTTCCCGTAAAGTTGTGGTTTGCAACATCCATGTGCTTTACAATCCAAATAGAGGGGAAATTAAGCTTGGCCAGGTCAGAGTCCTACTGGATAAGGCTCAAGCTGTTTCTCAACTTTGGAATAATTCCCCTATTATTATCTGCGGGGATTTTAATTGTACCCCTAAGAGTCCATTGTACAACTTTATCGCAGAACAAAAGTTAGATCTATCTGGAATAGATAGGAATAGAATATCAGGGCAAGCTTCTGCCGTAATTCGCGCACCATGGACTTACGGTCCTAATTCTAGGGAAAAAAGATTTGCTAATGGTTCAGTTCAGGCCACATCCGCTGAAGGTGACAAGGGAGTTACAATTGAACAAAATAGTTCTTTGTCAAACATGCAGAATCCGACCAGTGAGAGTAGCAGTTCTGAAAATCAAAATTCCCGTCCTGCTTTGGATATGTCTAATCAGACAAATGTGCAGTGTAGTAGGGAGAGTGATGCATGTGCAGGAAAAGTTACTCAGGGGGCTGTTGACCATAATACAGTTTTTGGTGAAGTTGATGGCATGAAAGAAGTGCCAAATCCTTCTAATAATATCGGTAGAATCCCAACTGATCATATAAATGGTGATGAAATTCATGACGTCGCACCTATAATGCCTTCAGCTCTTGAGACAGTTCAAACTGACCCAACCGGGATGGGAAGCACAGAACATATATCAGATGCTATCTCAACTTCAAGTCAAGAATCATTGAGTGAAAACTCCAACTTGCATGACCATGTAAATGAAAAACTAGAGAATTTTTCCATTGATGATATAGATAAAGCTGATGTAAGCAGTGGGAATATTGGTGAAGATGCCATTGATTTCATAAATGCCTTACATAATGCCGAAGAAGAAAGCAATGAAGTGAAGGATGACTTATCTCCAAGTCTGATTTTCAAATCTATTTTCGCAGAGCAAACTACTTATAATCCATCATCATGGACCTCTGCTGAGATAGAAACTGCAACAGGAAATGCAGAGACCACATTCTTGGAGCACCCTTTACTGCTCAAGAGCACATACACCGAAGCTACGAACTCTTCAGGGACTAGAGACCCCAATGGTGAACCCTTGGTAACCAGCTACAACAAGTGCTTCTTGGGCACTGTTGACTACATTTGGCGATCTGAAGGTCTGCAAACAACCAGAGTTCTTGCTCCAATACCTAAACATGTCATGGAAAACTCCCAAGGATACCCAACTAAGAAATGGGGTAGCGATCATATTGCCTTGGTTTCAGAGTTAGCTTTCTTGGAAGATGGTACTACTACTACCAGCAAGGATATTGTATAG 2271 0.4359 MRRTPTTNFLAATDASFSTAEMSSRPYHRGHRRGYSGRSYSGGRDQFVTGDDHLQSVRDANSAIRQGERRSSANQTQYYQNPPHDPRFRPPLFYYQNPPYNAHPPPQYQNQSFNPRPHLPPQYQNQSYNPRPRPYPHQPPHFRQPYDHRREFRPPQNFRPKPQDHREWELALTPAPPHCERFKVLSYNILADYLAMDHWRKLYYHIPSYMLDWKWRKSKIISELGLWSADIMCFQEVDKFDELVEDLKFKGYRGIWKMRTGNPVDGCAIFWRTSRCNLLYEESIEFNKLGLRDNVAQICVLEFINQNGSLPPSLTGSRKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAQAVSQLWNNSPIIICGDFNCTPKSPLYNFIAEQKLDLSGIDRNRISGQASAVIRAPWTYGPNSREKRFANGSVQATSAEGDKGVTIEQNSSLSNMQNPTSESSSSENQNSRPALDMSNQTNVQCSRESDACAGKVTQGAVDHNTVFGEVDGMKEVPNPSNNIGRIPTDHINGDEIHDVAPIMPSALETVQTDPTGMGSTEHISDAISTSSQESLSENSNLHDHVNEKLENFSIDDIDKADVSSGNIGEDAIDFINALHNAEEESNEVKDDLSPSLIFKSIFAEQTTYNPSSWTSAEIETATGNAETTFLEHPLLLKSTYTEATNSSGTRDPNGEPLVTSYNKCFLGTVDYIWRSEGLQTTRVLAPIPKHVMENSQGYPTKKWGSDHIALVSELAFLEDGTTTTSKDIV* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0686 756 MobiDBLite consensus disorder prediction 438 470 - -
Psa6g0686 756 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 33 744 - -
Psa6g0686 756 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 33 744 - -
Psa6g0686 756 MobiDBLite consensus disorder prediction 20 41 - -
Psa6g0686 756 Pfam Endonuclease/Exonuclease/phosphatase family 185 386 IPR005135 GO:0003824
Psa6g0686 756 MobiDBLite consensus disorder prediction 61 82 - -
Psa6g0686 756 Gene3D Endonuclease/exonuclease/phosphatase 565 753 IPR036691 -
Psa6g0686 756 Gene3D Endonuclease/exonuclease/phosphatase 156 474 IPR036691 -
Psa6g0686 756 MobiDBLite consensus disorder prediction 61 87 - -
Psa6g0686 756 SUPERFAMILY DNase I-like 173 384 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0686 Psa-Chr6 23266994 23276983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0686 213 381 EF-hand Containing Proteins AT5G54130 27.222 2.69e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0686 - - vvi:100254276 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0686 6 23266994 23276983 Psa6g0686 6 23266994 23276983 ECH