Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0653 ATGGAACCGGAGGTAAGCATCGAAGGATCATCCATGATCCAAGTCGCCGTAATTCCGATCGGAACTGTACCGCCGAACGTACTGCGAGACTATTACTCCATGCTACTCCCGCTCCACACGATCCCTCTCTCCGCGATCAGTTCCTTCTATACTGAGCACCAGAAATCGCCGTTCGCACATCAACCTTGGGATTCCGGTACTCTCCGCTTCAAATTCGTTCTCGGCGGTGCTACTCCGAGTCCATGGGAGGATTTTCAATCTCACCGTAAAACCCTCGCTGTCATCGGCATTGTTCACTGTCCTTCCTCGCCGGATCTCAACGCCGTCGTCGATCAATTCGCGAATTCGTATAAATCTAATCCTTCCTCGCTCGTTGAACGATGCTTCGCCTTTTACCCTAACGATTCACAGCTTGAGGAGGGAAGTAAGAGAGGTGGAAATTTGAGATTGTTTCCTCCTGCGGATCGTGCAACGTTAGAGTTTCATTTGAATACTATGATGCAAGAAGTAGCTGCTTCTTTGCTTATGGAGTTTGAGAAATGGGTTCTTCAAGCGGAATCTTCTGGAACTATTCTCAAGACGCCATTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGGAGACTTGGGCGTGCTCAAAAGACCATTGGTGATTACTGCTTGCTGGCAGGTTCTCCTGTTGATGCTAATGCTCATTATTCTACTGCATTAGAACTTGGGAGGTTGACTGGGGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGTGTTTGTGCCTTGCTGATTGACCGAAGGGGCCAGAAAGATTCAGCCTTGGAGGATGAAGTTAGATATCGTTATAATAGCGTCATCTTGAATTATAAGAAGTCACAAGATAATACTCAGCGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCGAGGTTCCTTTGCAGGAGAGAGCTGGCCAAGGAGGTGGTAGAGTTGTTGACCACAGCTGCAGATGGTGCTAAATCTCTAATTGATGCAAGTGATAGACTCATACTATACATTGAAATAGCTCGTTTGTATGGCAGTCTTGGATACCAGAGAAAAGCCGCCTTCTTTTCAAGGCAGGTTGCTCAGTTATATTTGCAGCAAGAAAATAGGCTGGCTGCAATTAGTGCGATGCAAGTTTTGGCAATGACCACAAAAGCTTATCATGTTCAAAGTAAATCATCAATCTCAGATCATTCTCTTCATAATAAGGGAATTGGATCAGATAAAGCCGATGGTGGGAAAATACATCACCAATCAGTTGTCTCATTGTTTGAGTCTCAATGGAGTACCATCCAGATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCCGGAGACCCTCTAACTGCATGGAGTGCAGCGGCACGACTACTTAGGTCCTACTATCCTCTAATAACTCCTGCTGGGCAAAATGGCCTTGCTAATGCACTTTCAAATTCGTCTGAGAGGCTACCACCAGGGACTCGTTGTGCTGATCCTGCTTTACCTTTTATAAGGGTGCATTCCTTTCCTGTCCACCAAAGACAAATGGACATTGTAAAACGTAATCCTGCTAGAGAAGACTGGTGGGTGGGTTCTGCTCCTTCGGGCCCTTTCATTTACACGCCATTCAGTAAAGGAGATACAAATAATATCAAGAAGCAAGAGCTTGTTTGGATTGTTGGAGAGCCGATCCAGGTTTTAGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGAGTCGATAGCATCTATCTGTCTGTGCATTCAGGAAATTTTGATGCTTTTCCTGTGAGCATAAGCCTTCTACCAAATTCTTCAAAAGTGATTACCTTATCTGGCATTCCAACATCAGTGGGGCCAGTTACAATTCCTGGGTGCATTGTTCATTGCTTTGGTGTTATTACTGAACACCTGTTTAGAGAGGTTGATAATCTGCTTCTTGGGGCTGCACAAGGGCTCGTCCTTTCTGACCCTTTCCGATGCTGTGGATCTCCAAAGTTGAAGAATGTATCTGTTCCAAGTATTTCTGTAGTACCGCCACTTCCATTGCTGATATCACATGTTGTTGGAGGTGATGGGGCCATCATTTTGTATGAAGGCGAAATTCGTGATGTGTGGATAAGCCTGGCTAATGCAGGCACAGTTCCTATTGAGCAAGCACATATATCATTGTCAGGGAAAAATCAAGATTCCGTAATTTCATATTCTTCTGAAACATTAAAATCCCGCCTCCCTCTAAAGCCTGGAGCAGAAGTGACATTCCCTGTGACTTTGCGAGCCTGGCAGGTTAGCGTGGCAGACGCTGATAATACGAGGCATTCCAAAGATGGAAGTTGCCCATCGCTATTGATCCACTACGCTGGTCCACTGAAAACATCTGAAGATCCAAACGCTGTATCCCCCGGTAGACGCCTTGTTGTTCCTCTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTTGTGAAGGCTCAGCTGCTTTCAATGGAATTTCCTGCTCATGTTAGTGAAAGTCTTCCTAAGTTTGATGATGTAAGTAATAGTCCCACCGGAGAACATGTTAACTCGGAGTCGAAAATAGACAGATTGGTGAAAATCGATCCTTTCAGAGGAAGCTGGGGACTGCGTTTTCTCGAACTTGAGCTGTCTAATCCAACTGATGTTGTGTTTGAAATCAATGTCTCTGTCAAACTGGAGAACAGTAACGAAGACAATCATTTAGCTGACCAGGATGCTACTGAATATGGCTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCAAGGGTTCTTGTGCCTCTTGAGCATTTTAAATTACCTGTCCTTGATGATTCCTTTTTAACAAAGGACACTCAAACAGATGGGGTTGGTGGAGGAAGAACTGCATCATTCTCTGAAAAGAGCAGCAAAGCCGAACTCAATGCTTGTATCAGGAATCTTGTATCTAGGATTAAGGTTCATTGGCACTCAGGACGCAATAGCTCCGGAGAGTTAAATATCAAGGATGCTATCCAGGCTGCTCTACAGACATCAATCATGGACGTGTTGCTGCCAGATCCACTGACATTTGGCTTCAGGCTTGTTAGAGATGGTGTTGAATCAAATAATCCCGATCCTGTCAAAGAATCTGTTTTACTTGAATCCCCTGCTTCCAAAAGTTCTGTCCTTGCACATGAAATGACACCAATGGTAGCTGTGGTCCGTAATAACACAAAGGATATGATCAAAATGAATCTTAACATTACATGCAGAGATGTAGCTGGGGAAAACTGTGTAGATGGTACCAAATCAACTGTTCTGTGGACCGGAGTTCTGAGTGATATTACCATTGAAATTCCTCCACTTCAACAAATCAATCATTCTTTCTGCCTGCATTTCCTTGTCCCAGGAGAGTATACGCTACTTGCCGCAGCAGTGATCGATGATGCGAATGACATCCTCCGGGCTCGTGCTAAGGCAACTTCAGCTGCTGAGCCTATTTTTTGTCGTGGACCACCATATCACCTTCGTGTCCTTGGGAATGCATGA 3558 0.4455 MEPEVSIEGSSMIQVAVIPIGTVPPNVLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGTLRFKFVLGGATPSPWEDFQSHRKTLAVIGIVHCPSSPDLNAVVDQFANSYKSNPSSLVERCFAFYPNDSQLEEGSKRGGNLRLFPPADRATLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELGRLTGDYFWYAGALEGSVCALLIDRRGQKDSALEDEVRYRYNSVILNYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSKSSISDHSLHNKGIGSDKADGGKIHHQSVVSLFESQWSTIQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSSERLPPGTRCADPALPFIRVHSFPVHQRQMDIVKRNPAREDWWVGSAPSGPFIYTPFSKGDTNNIKKQELVWIVGEPIQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSISLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFREVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPSISVVPPLPLLISHVVGGDGAIILYEGEIRDVWISLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSRLPLKPGAEVTFPVTLRAWQVSVADADNTRHSKDGSCPSLLIHYAGPLKTSEDPNAVSPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVSESLPKFDDVSNSPTGEHVNSESKIDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENSNEDNHLADQDATEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFLTKDTQTDGVGGGRTASFSEKSSKAELNACIRNLVSRIKVHWHSGRNSSGELNIKDAIQAALQTSIMDVLLPDPLTFGFRLVRDGVESNNPDPVKESVLLESPASKSSVLAHEMTPMVAVVRNNTKDMIKMNLNITCRDVAGENCVDGTKSTVLWTGVLSDITIEIPPLQQINHSFCLHFLVPGEYTLLAAAVIDDANDILRARAKATSAAEPIFCRGPPYHLRVLGNA* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0653 1185 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1183 IPR013935 -
Psa6g0653 1185 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 268 IPR013935 -
Psa6g0653 1185 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 749 IPR013935 -
Psa6g0653 1185 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 10 196 IPR013935 -
Psa6g0653 1185 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1183 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0653 K20306 - gmx:100784850 2091.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0653 6 22173262 22180979 Psa6g0653 6 22173262 22180979 ECH