Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0639 ATGGATACATTGCCGACGACGTCGACGGCGAAGAGAGGAGGAAGATCGAAGGTCCCTCAGACATCAAAGCCTTCTCTCCTCTTAGCCTTCTGCTCTTGTGTTGCCTGGCTTTACGTCGCCGGCAGGTTATGGCAAGATGCAGAGAACCGAAATTTACTTGCTAGTCTTCTTAAGAAGAACTCAGCTCAGAGACCTAAGGTTCTTACTGTGGAAGATAAGTTAGTGGTACTAGGGTGCAGGGATCTGGAAAAGAGGATTGTTGAAACTGAGATGGAATTGACATTGGCCAAGAGCCAAGGGTACCTCAAAGGGCAAAGGCAGCAAACTGCCTCTTCTGACCGTAGGCTTCTTGCTGTTATTGGAGTGTATACTGGATTTGGAAGCCATTTGAAAAGAAATGTATTCAGAGGGTCTTGGATGCCTAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTGGTGATACGTTTTGTACTTGGTCGGAGTCCTAACCGAGGTGATAGCTTGGATCGCAATATTGATAATGAAAACCGCTCAACAAAGGATTTCTTGATTCTTGAAAATCACGAGGAAGCTCAAGAAGAGTTGCCTAAAAAAGCAAAAATATTCTTTAGTACTGCAGTTAAGAACTGGGATGCTGATTTTTATGTGAAAGTCGATGACAGTATTGACATTGATCTGGAGGGTTTAATTAAACTTCTTGAACATCGCCGTGGCCAGGATGGCGCATATATTGGATGCATGAAGTCAGGAGACGTGATATCAGAAGAGGAAAGCCTTGGTATGAACCTGATTGGTGGAAATTTGGGATGA 816 0.44 MDTLPTTSTAKRGGRSKVPQTSKPSLLLAFCSCVAWLYVAGRLWQDAENRNLLASLLKKNSAQRPKVLTVEDKLVVLGCRDLEKRIVETEMELTLAKSQGYLKGQRQQTASSDRRLLAVIGVYTGFGSHLKRNVFRGSWMPRGDALKKLEERGVVIRFVLGRSPNRGDSLDRNIDNENRSTKDFLILENHEEAQEELPKKAKIFFSTAVKNWDADFYVKVDDSIDIDLEGLIKLLEHRRGQDGAYIGCMKSGDVISEEESLGMNLIGGNLG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0639 271 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 258 - -
Psa6g0639 271 Coils Coil 79 99 - -
Psa6g0639 271 Pfam Domain of unknown function (DUF4094) 22 99 IPR025298 -
Psa6g0639 271 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 258 IPR002659 GO:0006486|GO:0016020|GO:0016758
Psa6g0639 271 Pfam Galactosyltransferase 131 259 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0639 Psa-Chr6 21677889 21681736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0639 75 258 Glycosyltransferase AT2G25300 77.717 3.43e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0639 K20854 - gmx:100816327 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0639 6 21677889 21681736 Psa6g0639 6 21677889 21681736 ECH