Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0614 ATGAAGTTCATGAAGTTAGGTTCCAAGCCTGATGCACTTCAATACGATGGCAACTTTGTCAGGTATATATCTTCTGAATTGGCTACAGATATTATCATAGCTGTTGGTGAAGTTAAGTTTGATCTTCACAAGTTCCCTCTACTGTCCAAAAGCAATCGCTTACAGAAGTTGGTGTCAAAAGCTAACGAAGATAATGCTGATGAGATTTATTTGGACGATTTCCCGGGAGGACCTAAAGCCTTTGAAATATGTGCGAAGTTTTGCTATGGAATGACTGTTACTCTAAATGCTTACAATGTCGTGGCTGCTCGATGTGCGGCTGAGTTTCTTGAGATGACAGAGGATATGGATAGAGGAAACTTGATTTTCAAAATTGACGTGTTTCTCACCTCGAGTATATTTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTGCTAAATCACTTTTCCCTTGGTCCGAGGATCTAAAGATTGTCGGAAGATGCATAGATTCCATAGCTTCGAAAACTTCTGTTGATCCGGTGAACATCACTTGGTCTTACACTTACAACAGGAAACTAGCAAAGGTTGATAAAATTGTCGAGGACAAAGTAACGGCAAAAGAGAAATTTGAGTCTGTTCCGAAGGATTGGTGGGTTGAGGATATATGTGAGCTGGACATTGATCTCTATAAACGCGTAATGATTACTGTGAAATCAAAGGGAAGAATGGACGGTGTTGTGATCGGCGAGGCACTGAAAATGTATGCAGTTAGATGGTTACCTGATTCAGTTGATGCATTGGTTTCTGATGCTCATGCCCGGAGGAACAAATCTCTGGTTGAAACAATTGTGTGTTTATTACCATGTGATAACGGTGTAGGTTGTTCTTGTAGTTTCTTGTTGAAACTATTGAAAGTGGCCATACTTGTTGAAGCGGATGAGTCGTCCAGAGAAGAGTTGATGAACAGCATCAGCCTAAAATTGCACGAAGCTTCCGTCAAAGATATACTGATTCCAGCAAGGTCTCCGCAGATTACTACTTATGATATTGATTTGGTGCAAGATCTTTTGAACCGGTATATGACTAATGAAAAGAAAAACCGTGGTGTGGATATTGTAGACAAGAATGATAAGGTATTTGGTGAATCGATTTTAGGGAATAGGTCGATACTGAATGTTGGCAAGTTGGTTGATGGTTATCTTGGAGAAATTGCACATGATCCAAATCTCAGCCTCTCGAGTTTCGTTGATTTGTCACAGTCAATTCCAGAGTTTGCTCGACCAAATCATGATGGTCTATACAAAGCCATTGACATCTACTTGAAGGAGCACCAAAGTCTAACAAAATCTGAAAGAAAGAACATATGTGGACTGATGAATGTCAAGAAATTAACTGCAGATGCATCGGCACACGCTGCACAAAACGAACGTCTTCCCGTTCGAGTTGTTGTGCAGGTTCTATATTTCGAACAAGTTAGAGCTGCAGCAAGCACCCGGGCATTTGCCAGTCCACGCTCACTTTTAAACGGAGATGCGGAGTATGAGAAAACATTGGGAGGGAGCTGCCATTCCCTCATCAGACAAACAAGCCGCATGAAGATCAAAGACGACGAGTTTCGCAGGAGTGTGAGGTTGAGTAAGAAGAGTAGCAAAAACAGCAGAAGCGGCATGCAGTTGCTTCCGTCTCGGTCGAGGAGAATATTTGATAAGTTATGGAATGTTGGTAAAGGACAAGGAGAGAATAAGAGTTCAGAAACTTCAGGGGGTTCTAATAGTCCAACTTCTGTAGTGCTTGGAGATACCAAGTCTTCTGGTTCATCTTTAAGACACCAAAGACATTCTATCTCTTAG 1836 0.4139 MKFMKLGSKPDALQYDGNFVRYISSELATDIIIAVGEVKFDLHKFPLLSKSNRLQKLVSKANEDNADEIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEFLEMTEDMDRGNLIFKIDVFLTSSIFRSWKDSIIVLQTAKSLFPWSEDLKIVGRCIDSIASKTSVDPVNITWSYTYNRKLAKVDKIVEDKVTAKEKFESVPKDWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKMYAVRWLPDSVDALVSDAHARRNKSLVETIVCLLPCDNGVGCSCSFLLKLLKVAILVEADESSREELMNSISLKLHEASVKDILIPARSPQITTYDIDLVQDLLNRYMTNEKKNRGVDIVDKNDKVFGESILGNRSILNVGKLVDGYLGEIAHDPNLSLSSFVDLSQSIPEFARPNHDGLYKAIDIYLKEHQSLTKSERKNICGLMNVKKLTADASAHAAQNERLPVRVVVQVLYFEQVRAAASTRAFASPRSLLNGDAEYEKTLGGSCHSLIRQTSRMKIKDDEFRRSVRLSKKSSKNSRSGMQLLPSRSRRIFDKLWNVGKGQGENKSSETSGGSNSPTSVVLGDTKSSGSSLRHQRHSIS* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0614 611 MobiDBLite consensus disorder prediction 572 611 - -
Psa6g0614 611 Pfam BTB/POZ domain 25 114 IPR000210 GO:0005515
Psa6g0614 611 MobiDBLite consensus disorder prediction 568 611 - -
Psa6g0614 611 Gene3D Potassium Channel Kv1.1; Chain A 12 118 IPR011333 -
Psa6g0614 611 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Psa6g0614 611 MobiDBLite consensus disorder prediction 532 555 - -
Psa6g0614 611 CDD BTB_POZ_NPY3-like 20 124 - -
Psa6g0614 611 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 597 IPR029961 GO:0060918|GO:0099402
Psa6g0614 611 SUPERFAMILY POZ domain 19 114 IPR011333 -
Psa6g0614 611 PANTHER OS12G0117600 PROTEIN 4 597 IPR043454 -
Psa6g0614 611 Pfam NPH3 family 211 464 IPR027356 -
Psa6g0614 611 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Psa6g0614 611 SMART BTB_4 29 127 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0614 Psa-Chr6 20582937 20586644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0614 22 515 EF-hand Containing Proteins AT3G44820 31.418 3.52e-87 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0614 - - gmx:100809437 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0614 6 20582937 20586644 Psa6g0614 6 20582937 20586644 ECH