Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0606 ATGCAGGAGGAAGAGAATAAGGAAGATTCAGTTTCTGAATCTCAGGATCAAAATGAACAGAAAAAGTCAAAGGGTTATTGGATTTGGAACTGTTTTTACATTCCAATCCATTGGTTTAAAATGCTTTCAAGGGAAATGCATTGGAGTTTTGTGTTAGGAGTTGTTGTTGTTTATGGAATAAGTCAAGGTGTTGGTGGAGCTCTTGCTGGTGTTGGAACAAAGTATTATATGAAAGATGTTCAGAAAGTTCAACCATCTGAAGCACAGGTTTATGCTGGAATCACTTCTATTCCTTGGATTGTTAAACCCTTATGGGGTCTTCTTACTGATGTTGTGCCTATATTGGGATACCGGAGAAAACCTTATTTCATTTTTGCTGGTTTATTAGGAGCAACTGCCATGCTTTTGTTATCTTTTCATGAAAACCTACATCTTGTGTTGGCTCTTTTAGCATTAACAGCAGGGAGTGCTGGGGTGGCGATAGCCGACGTGACCATTGATGCTTGTGTTGCACAGAACAGTATCTCTCATCCTTCCCTTGCCGCCGACATGCAAAGTTTATGTGCCTTTAGTTCTTCCGTTGGAGCACTATTAGGATTCTCCGTTAGTGGCATCTTCGTTCACCTTATAGGCCCTATGGGAGTATTTGGTTTGTTGACTATTCCGGCGGGACTTGTAATTTTGATTGGATTTCTGCTTGACGAGCCTCGAATGCAAAATTTCTCTTACAGACAGGTGAACCAAAATTTTGTGGATGCTAGCAAGGCGATGTGGACGACATTGAAGAGTGAAAATGTATGGAGGCCTTGTTTATACATGTATCTATCCCTTGCGCTGAGTTTGAATATCCTCGAAGGAATGTTTTATTGGTATACAGACTCAAAGGACGGACCATCTTTCTCTCAGGAGAGTGTAGGTTTCATATTTTCCATCAGTTCAATCGGTTCCCTTTTAGGCGCAATACTATACCAATACGCGCTAAAGGATTACGCATTCAGAGACTTACTCTTTTGGACTCAGTTACTTTATGGCTTATCAGGGATGTTTGATCTGATTCTTGTCTTGAGATTGAACCTAAAATTCGGTATACCAGATTACGTCTTCGTCGTTTTCGTCGAAAGCATAGGTCAAATGACTATTCGGCTAAAATGGATGCCTATGCTTGTACTAAGCTCCAAGCTTTGTCCTTCTGGCATCGAAGGAACATTCTTCGCTCTATTAATGTCAATCGATAACGTTGGACTTCTCTCGTCGTCATGGGCCGGCGGATTCGTACTTCATGTACTAAAGATCACAAGAACGAAGTTTGATAATATTTGGTTGGCGATTTTGATTCGGAATATTTTAAGAATCACTCCACTTTGTATGCTGTTTTTGGTGCCTAGAGTTGATCCTAACTCTTTTGTTCTTCTTCCAAAAGAAAGTGAGGATTCAAAGGTGGATATGGAAGCTTCAGAAACCAAAAATGTTGAATTGATTTCCCTTGTACACAGTGTTGATGATAATATCTAA 1512 0.4015 MQEEENKEDSVSESQDQNEQKKSKGYWIWNCFYIPIHWFKMLSREMHWSFVLGVVVVYGISQGVGGALAGVGTKYYMKDVQKVQPSEAQVYAGITSIPWIVKPLWGLLTDVVPILGYRRKPYFIFAGLLGATAMLLLSFHENLHLVLALLALTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFSVSGIFVHLIGPMGVFGLLTIPAGLVILIGFLLDEPRMQNFSYRQVNQNFVDASKAMWTTLKSENVWRPCLYMYLSLALSLNILEGMFYWYTDSKDGPSFSQESVGFIFSISSIGSLLGAILYQYALKDYAFRDLLFWTQLLYGLSGMFDLILVLRLNLKFGIPDYVFVVFVESIGQMTIRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGLLSSSWAGGFVLHVLKITRTKFDNIWLAILIRNILRITPLCMLFLVPRVDPNSFVLLPKESEDSKVDMEASETKNVELISLVHSVDDNI* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0606 503 Gene3D MFS general substrate transporter like domains 36 447 IPR036259 -
Psa6g0606 503 CDD MFS_FBT 53 458 - -
Psa6g0606 503 SUPERFAMILY MFS general substrate transporter 51 458 IPR036259 -
Psa6g0606 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 17 501 IPR039309 -
Psa6g0606 503 TIGRFAM fbt: folate/biopterin transporter 39 465 IPR004324 GO:0016021
Psa6g0606 503 Pfam BT1 family 62 228 IPR039309 -
Psa6g0606 503 Pfam BT1 family 272 462 IPR039309 -
Psa6g0606 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 17 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0606 Psa-Chr6 20401594 20405329 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0606 - - ccaj:109816000 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0606 6 20401594 20405329 Psa6g0606 6 20401594 20405329 ECH