Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0605 ATGTTGAACTTTCCTTCCTCTTGTTCTTCTTCAAACATCATTAATCTCTCCAAAAACACCATTCTTATTCTTTCACTATTACTCTTCACACTTCCAAAAACAAACTCACTTTTCTTCAACATAACAAACTTCGACGACCCAACTGTCGCAAACAACATCTCATACCAAGGTGACGGAAAGTCAACCAACGGTTCCATCGATCTCAACAAAGTAAGTTACCTTTTTCGTGTAGGGAGAGCAATCTATTCACAGCCTTTACATTTATGGGACAAAAACACTAAGACTCTCACTGATTTCACTACAAGTTTCACTTTCACTATTGATAAAGTGAATGATACTTCCTATGCGGATGGTTTTGTGTTTTATATTGCTCCATTGGGTTATCAGATTCCACCTAATTCAGCGGGTGGTGTTTTTGGTATTTTTAATGCTACTACTAATAGTAATTCTCTTATGAATTATGTTGTTGCGGTTGAGTTTGATACTTTTGTTGGGGCTACTGATCCACAAATGAGACATGTTGGTATTGATGATAATTCTTTGACTTCTGTTGCTTTTGGAAAATTTGATATTGATAATAATCTTGGTAAGATTTGTTATGTTTTGATTGATTATAGTTCGGATAAGAAGCTGTTGGAAGTGTTTTGGTCTTTTCATGGAAGGATTGTTAAAGGTGATGGAAATGGAAATGGAAATTCTTCACTGTCTTATCAGATTGATTTTATGCAGAAACTGCCTGAGTATGTGAATATAGGATTTTCGTCTTCCACGGGTTTTTCAACCGAAAGTAATATTATTCATTCTTGGGAGTTTAGTTCGAATTTGAAGGCGGACTCGTCACCGGATGTTCTGTTGGAGGGAAATGGAAGAAAAGGGTCGTTGAAAACGGTTGTGATTGTTGTTGCTGTCCTTGTTCCGGTTATTTTGGTATTTTTTATAGCTAGTGTTGTTAGTTGGTTGATAGTGAAGAGGAAAAGGAAGAATGTTGATGATGGGCTTGATGAATATGGAATACCTGTTTCGGCGAAATTTGATTTGGATAAAGCAACAATACCGAGAAGATTCGAATATAGCGAATTAGTTGCAGCTACTAATGCAACTGGGAGAAGGGTTTTTCAAGATGGGTTATGGTGTACTCATTCAAATGATAAAGAAAGACCTAAGGCTTATGAGGTGATTAAGGTTCTTCAACATGAAATGGAATTACCTGAACTTCCACTCGACATGCATGACCGCGCTCCTCCTATTGTAGCCTTTAGGCCGACATCCAATGCTCCCTCATTGTCACCAAATATGACTAACAGTCTTGTCGCTGTTGGACGTTAG 1326 0.3748 MLNFPSSCSSSNIINLSKNTILILSLLLFTLPKTNSLFFNITNFDDPTVANNISYQGDGKSTNGSIDLNKVSYLFRVGRAIYSQPLHLWDKNTKTLTDFTTSFTFTIDKVNDTSYADGFVFYIAPLGYQIPPNSAGGVFGIFNATTNSNSLMNYVVAVEFDTFVGATDPQMRHVGIDDNSLTSVAFGKFDIDNNLGKICYVLIDYSSDKKLLEVFWSFHGRIVKGDGNGNGNSSLSYQIDFMQKLPEYVNIGFSSSTGFSTESNIIHSWEFSSNLKADSSPDVLLEGNGRKGSLKTVVIVVAVLVPVILVFFIASVVSWLIVKRKRKNVDDGLDEYGIPVSAKFDLDKATIPRRFEYSELVAATNATGRRVFQDGLWCTHSNDKERPKAYEVIKVLQHEMELPELPLDMHDRAPPIVAFRPTSNAPSLSPNMTNSLVAVGR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0605 441 Pfam Legume lectin domain 38 279 IPR001220 GO:0030246
Psa6g0605 441 Gene3D - 34 283 - -
Psa6g0605 441 CDD lectin_legume_LecRK_Arcelin_ConA 39 275 IPR001220 GO:0030246
Psa6g0605 441 PANTHER - 375 412 - -
Psa6g0605 441 PANTHER - 19 366 - -
Psa6g0605 441 PANTHER PUTATIVE-RELATED 375 412 - -
Psa6g0605 441 PANTHER PUTATIVE-RELATED 19 366 - -
Psa6g0605 441 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 277 IPR013320 -
Psa6g0605 441 ProSitePatterns Legume lectins beta-chain signature. 156 162 IPR019825 -
Psa6g0605 441 ProSitePatterns Legume lectins alpha-chain signature. 245 254 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0605 Psa-Chr6 20399927 20401966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0605 19 376 Receptor kinase-like Gene Family AT5G10530 36.957 1.73e-56 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0605 - - vun:114193012 377.096