Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0601 ATGTCAACCCAACAAGATCAAACCAAAAACCCATTCATATCAATCCTAACCCAACCAATACAATGGCTAACAATGCTAACCCATCATCTCAACCCATCTTTCATAGCAGGAATTTTCCTAATATACGGCATAGGCCAAGGCTTCTCCGGTTCATTCTTCAAACTCGTTTCAGATTATTACTGGAAAGACATTCAAAAAATACAACCTTCAACTGTTCAACTCTACGTTGGTATTTACTTCATACCATGGATTCTCAAACCCATTTGGGGGATTCTCACCGACGCTTTTCCGTTACTGGGTTATCGCCGTCGCCCTTATTTTATCCTCGCCGGAGTTGTTGGATTGGTGTCGGCTTCTGTGGTTGCGGTGAAAGGAAACCTTGCTCCTGTGGCGGCGTTGATGTGTTTTCTTGGTGTTTCTGCTAGTCTTGCTATTGCGGATGTTACTATTGATGCTTGTATTGCAAGGAATAGTATTGAGGTTCCTGGGTTGGCTCCTGATTTGCAGAGTTTGTGTGGCTTTTGTTCGGGTTCTGGTGCTCTTATTGGGTATCTTGTTAGTGGATTCTTTGTTCATCATCTTGGTCCACAGGGGTCACTTGGTCTTATGGCAATTTTTCCTGCTTTGACAATTGTACTGGGTTTTGTGATCTATGAAAAGAAAACCACTGGCTTGCATAATGAAAAGAAGCAGGGAGCGATGGAGAATGCAGGAATGACAATTAGAAGCATGTACAAAACAATAAAGTATCCTCAAGCGTGGAAGCCTTCTCTTTACATGTTCCTTTCCCTTTCTCTTAATGTAACCACTCATGAAGGTCATTTTTACTGGTATACTGATTCAAAAGCCGGTCCTGCATTCTCTCAGGAGTTTGTTGGAGTAATCTATGCAATTGGAGCAGTGGCTTCAATAATAGGTGTTCTAATCTACCACAAGTATCTAAAAAACTACACATTTAGAAACCTAGTATTCTATGCACAACTCCTATACGCAATATCAGGCGTATTGGACTTAATCTTTGTTCTCCGTTGGAATTTGAAAATTGGAATCCCTGACTACTTTTTTGTTGTCATTGAAGAAACCGCTGTTAGAATCACAGGCAAAATAAGGTGGATGCCAATGATGGTACTGAGTGCAAAACTATGTCCTCTAGGAATTGAAGGAACATTTTTCGCTCTTTTAATGTGTATTGATAGTATTGGTGCACTTATATCCAAATGGGGTGGAGGGTTACTTCTACGTGTCCTTCATATTACCAGAAGTGATTTTAACAACCTATGGTTGGCTGTTCTTATAAGGGACATTCTTAGATTTGTTACACTTGTTTTGGTTTTTCTTGTTCCTAATGTAGGACCTTATGAAGGATTGCTTCCTTCTGATGGTTGTGAAATGGATAAAAGAGATGGTAATGTTGATGAAGAGACCTTGGAGCTTGTTCCCATCAACGCCAAAATTGAAGTTTAG 1464 0.4023 MSTQQDQTKNPFISILTQPIQWLTMLTHHLNPSFIAGIFLIYGIGQGFSGSFFKLVSDYYWKDIQKIQPSTVQLYVGIYFIPWILKPIWGILTDAFPLLGYRRRPYFILAGVVGLVSASVVAVKGNLAPVAALMCFLGVSASLAIADVTIDACIARNSIEVPGLAPDLQSLCGFCSGSGALIGYLVSGFFVHHLGPQGSLGLMAIFPALTIVLGFVIYEKKTTGLHNEKKQGAMENAGMTIRSMYKTIKYPQAWKPSLYMFLSLSLNVTTHEGHFYWYTDSKAGPAFSQEFVGVIYAIGAVASIIGVLIYHKYLKNYTFRNLVFYAQLLYAISGVLDLIFVLRWNLKIGIPDYFFVVIEETAVRITGKIRWMPMMVLSAKLCPLGIEGTFFALLMCIDSIGALISKWGGGLLLRVLHITRSDFNNLWLAVLIRDILRFVTLVLVFLVPNVGPYEGLLPSDGCEMDKRDGNVDEETLELVPINAKIEV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0601 487 SUPERFAMILY MFS general substrate transporter 38 448 IPR036259 -
Psa6g0601 487 TIGRFAM fbt: folate/biopterin transporter 19 452 IPR004324 GO:0016021
Psa6g0601 487 Gene3D MFS general substrate transporter like domains 10 444 IPR036259 -
Psa6g0601 487 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 3 481 IPR039309 -
Psa6g0601 487 CDD MFS_FBT 37 445 - -
Psa6g0601 487 Pfam BT1 family 46 222 IPR039309 -
Psa6g0601 487 Pfam BT1 family 258 449 IPR039309 -
Psa6g0601 487 PANTHER FOLATE-BIOPTERIN TRANSPORTER 6-RELATED 3 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0601 Psa-Chr6 20344974 20347848 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0601 - - mtr:MTR_1g014220 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0601 6 20344974 20347848 Psa6g0601 6 20344974 20347848 ECH