Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0575 ATGTATAACTCAACCACGCGTGTTACCAAAGAGCCCTTAGGTTCACAAATTGGGCGTTTCACATTCGATACGTCGTCGTTTCTCAACTTAAGCTCCGAAGCTTGTTCTCCATCACTCATCTCAAATTTCTTGTACTTCAACAACGTAGCGCGTGGAGCAAAACGCACCGTTTCGTTGAGCTCAAAGCTTGGTGGTGGTGGATATAGGTTCCGGGACATTCTTTACGATTTTAACAGAGCTGTTAGGTTTCATTGTGAGAGAATTCCGCTCGGGTTTGCTTCGTTGCAAGTAGGTGACGGTAACGGTGACGGGAATAATGGTGGTTACGGTAACGGTGAGGGTGATGGGAATGGTGTTGGAAGAATTGGGAATGGGACTGTTGTGGAAGATGATGGATTGGAATTGAAGGGCTCTGGTTGTGGGAAACCTAAAAAGGTTTTGATTTTGATGAGTGATACTGGTGGTGGTCATCGAGCTTCTGCTGAAGCTATTAAAGCTGCTTTTTATCAAGAATATGGCGATGATTACCAGGTGTTTGTTACCGATTTGTGGTCTGAGCACACACCTTGGCCGTTCAACCAACTGCCCAAGAGCTATAGCTTTTTGGTGAAACATGGTCCATTGTGGAAGATGACCTACTATGGAACTGCCCCACGTCTAGTTCATCAGTCCAATTTTGCCGCAACTTCAACATTCATAGCTCGTGAGGTTGCTAAAGGGTTAATGAAGTATCAGCCTGACATAATAATCAGTGTGCATCCACTTATGCAACACGTTCCACTTCGCATTTTGAGATCAAGGGGTCTTTTAGATAAGATTGTTTTTACAACAGTTATTACAGATTTGAGTACATGCCATCCAACATGGTTTCACAAGCTTGTAACTAGATGTTATTGTCCAACTACAGATGTTGCAAAAAGGGCAATGAAAGCCGGACTCCAGCAAACCCAAATAAAGATTTATGGCCTACCTGTTAGACCTTCCTTTGTTAAGCCTGTTCGGCCGAAGGAAGAACTGAGGAGAGATTTAGGAATGGATGAGGATCTTCCTGCTGTATTATTGATAGGAGGAGGTGAAGGTATGGGTCCTATTGAGGCTACTGCTCGGGCACTTGGAGATTTATTAAACGAGGATGGGATTCCCACAGGTCAGATCCTTGTGATCTGCGGTCGCAATAAAAAGCTTGCAAACAAACTCAGTTCTATTAAGTGGAAGATTCCTGTAAAGGTCAAGGGGTTTGTTACCAAAATGGAGGAATGCATGGGAGCTTGTGATTGCATTATTACAAAGGCAGGCCCAGGGACAATTGCAGAGGCTATGATTCGAGGCCTCCCTATTATTTTAAATGATTACATTGCCGGGCAGGAGGCTGGCAATGTTCCCTATGTAGTTGAAAATGGATGTGGAAAGTACTCTAAATCACCTAAGGCGATAGCGAAGATCGTTGCGGACTGGTTTGGTCCAAAATCCGACGAATTAAAAGAGATGTCACAAAATGCATTGAAGCTAGCAAGGCCAGATTCTGTGTTCAAGATTGTCCATGACATGCACGAGCTAGTAAAGCAAAGAAGCTTATTAAAAGAGTATTCTTGTACAGCTTAA 1602 0.4357 MYNSTTRVTKEPLGSQIGRFTFDTSSFLNLSSEACSPSLISNFLYFNNVARGAKRTVSLSSKLGGGGYRFRDILYDFNRAVRFHCERIPLGFASLQVGDGNGDGNNGGYGNGEGDGNGVGRIGNGTVVEDDGLELKGSGCGKPKKVLILMSDTGGGHRASAEAIKAAFYQEYGDDYQVFVTDLWSEHTPWPFNQLPKSYSFLVKHGPLWKMTYYGTAPRLVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSRGLLDKIVFTTVITDLSTCHPTWFHKLVTRCYCPTTDVAKRAMKAGLQQTQIKIYGLPVRPSFVKPVRPKEELRRDLGMDEDLPAVLLIGGGEGMGPIEATARALGDLLNEDGIPTGQILVICGRNKKLANKLSSIKWKIPVKVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKYSKSPKAIAKIVADWFGPKSDELKEMSQNALKLARPDSVFKIVHDMHELVKQRSLLKEYSCTA* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0575 533 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 85 523 - -
Psa6g0575 533 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 157 325 IPR009695 GO:0009247|GO:0016758
Psa6g0575 533 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 85 523 - -
Psa6g0575 533 Pfam Glycosyltransferase family 28 C-terminal domain 354 498 IPR007235 GO:0016758
Psa6g0575 533 Gene3D Glycogen Phosphorylase B; 334 504 - -
Psa6g0575 533 CDD GT28_Beta-DGS-like 146 520 - -
Psa6g0575 533 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 144 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0575 Psa-Chr6 19278420 19285049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0575 41 533 Glycosyltransferase AT4G31780 68.939 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0575 K03715 - gmx:100804814 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0575 6 19278420 19285049 Psa6g0575 6 19278420 19285049 ECH