Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0558 ATGGAAATGGCAACTTTCTCAAATTTCAACTACACATTTTCTTCGAAGAATACTAGGTACCTGTCTGTGTTTCATGGATTAAGAAACCAAAACCTAAATGGTTGTTTATTCAACAAATGTTTCCAGTTTCAACCTCAATCTATGTCTTCTAGGATGGTGTCAGCTTCTACCAACATAGCTTCTGATATGTATGTTGGAAGAAACACAAGCAGAATCAATAGCAAGATTTACACCAACATAGACTCTTGTCTTGTGATTCCACCACCCACTTCAACCAAACCTAGGGCTATAATCAAATTCATTGGTGGTGCTTTCATTGGAGCTATTCCTCAACTTACTTATGGCTATTTGATTGAGTTATTGGCTAAGGAAGGGTTTCTGGTTGTTGTGGTACCTTACAATGTGACATTTGATCATTCTCAAGCTGCTAAGCAAGTATATGAGAGGTTTCATACTTGTTTGAGTACAATTCTCACATCTGGGTTGCCTCAATTCAGTTTGTCACCTGCTCAGCTTGGAGACCTTCCTCTTTTCTCTGTTGGCCATAGCAATGGTGCACTTCTTCAAGTACTCACAGGAAGCTTATTTTCTGAGAAACTACCCAAGGCAAATGCTGTAATCGCTTACAACAACAGACCAGCGACAGAGGCGGTTCCTTACTTTGAGCAGTTGGGTCCTGCAGTCAGCCAGATGATGCCGGTTGTGGAAGCAAATCCTATTCTGTCATTAGCAAGAAATGCACAAGGAGATGCATGGAAGATGATGCTGGATACTGTCGGGTCAGTTCTGCAAGAAAGCGAGCAGGAAGTTCTGAATTCTTTAACTAAATTTGTTGATCAGCTGCCTTTAGTATTTAATGAGGTTACACAAGGAGTCTCAGAGTTCAAGCCGACACCATCAGAAAATCGTGATTGCTTTAAAACTTCATACAATGTCAAACACACATTATTGGTGAAATTCAATTCCGACACAATTGACGAGACAAATATTCTTGAAGAAACACTCACCCCTCGTGTCGATTCTTTCGGCGGTACGGTAGAAAAAGTAGAATTGAGTGGTAACCACATCACACCATGCATCCAGGAACCAAGATGGCAAGTAGGTAAATTGTATACTCCAGCAGATGCTGTTGCACAAAGGCTTAAATCTCTTTCTATGAATGATACTAGAATCCTTGCTAAAACCATTAGTGATTGGTTCAAACGTTTTGAGGATTGA 1218 0.4031 MEMATFSNFNYTFSSKNTRYLSVFHGLRNQNLNGCLFNKCFQFQPQSMSSRMVSASTNIASDMYVGRNTSRINSKIYTNIDSCLVIPPPTSTKPRAIIKFIGGAFIGAIPQLTYGYLIELLAKEGFLVVVVPYNVTFDHSQAAKQVYERFHTCLSTILTSGLPQFSLSPAQLGDLPLFSVGHSNGALLQVLTGSLFSEKLPKANAVIAYNNRPATEAVPYFEQLGPAVSQMMPVVEANPILSLARNAQGDAWKMMLDTVGSVLQESEQEVLNSLTKFVDQLPLVFNEVTQGVSEFKPTPSENRDCFKTSYNVKHTLLVKFNSDTIDETNILEETLTPRVDSFGGTVEKVELSGNHITPCIQEPRWQVGKLYTPADAVAQRLKSLSMNDTRILAKTISDWFKRFED* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0558 405 PANTHER INITIATION FACTOR 4F SUBUNIT (DUF1350) 41 403 - -
Psa6g0558 405 Pfam Protein of unknown function (DUF1350) 92 400 IPR010765 -
Psa6g0558 405 PANTHER OS04G0405600 PROTEIN 41 403 IPR010765 -
Psa6g0558 405 SUPERFAMILY alpha/beta-Hydrolases 85 200 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0558 Psa-Chr6 18932075 18935463 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0558 - - gmx:100799131 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0558 6 18932075 18935463 Psa6g0558 6 18932075 18935463 ECH