Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0549 ATGATGATGAAACCAAAGTTTGAGTTTGAAAATGAATCTGTGACTGATTTGAGTAATGGTCATGAGGAATTACTGAATGACATTGAAGAATTAAGCAAAGCTCTTTACTCGAATAAAGCCCCTATTAAGCCTTCCATCATCGCTTCGGTTCGTAATAACCGATCCAAATCTGTCGAAATAACCCGAATTCCGAAGCCCCCACCTAACTCAAACCCGAGATTTGTAAGTCAGGATCTGTTGATGGAGGACAAGAAACTGTCTTCAAAATGGAATTGGAAGAAGCCCTTGAAAGCTTTGACACTTATTGGTTCTCAAAAGTTCATTTGTCGATTTAGTCTTCATGTTCACTCAATCGAGGGCCTGCCTTCGAGTTTCGATGGGGTTAGGTTAAGTGTGCATTGGAAAAGGAAAAACAGTATTTTGCAGACCTGTCCATCGAGGGTATTAAATGGTTTGGCAGAGTTCGACGAAACTTTGATACATCGATGTACAGTTCATGGTAGCCGTACAGTGTCTGGTCATTCTGTAAAGTATGAATCCAAGTGTTTCTTGATTTATGCTTCTGTTGTCGGGGAACCTGAACATAACTTAGGGAAACATCAAGTTGATCTTACAAGGCTTTTACCTCGGAGTTTAGAAGATTTATGGGGTAATCAAAGTTCTGGGAAATGGAGTACTAGTTTTAGGTTGACTGGAAAAGCATTAGGAGCTAGAATAAATGTTAGTTTTAGTTATCAAGTTATGAAGGATGAGTTAATGGGATTTGGTTGTCATAATGTGAATGTTGGTAACGTTATTAACTTGAAGACAGGTCCAAGCAGCGCAGACAATGTTGTCGGTTTTAGTCCTAACAATAGGGTTATAAAGCTTCGGAGGGATCAGAATGACGCAGTGTTATCGAACGAAGCAGTGATGAATTCTGGCTCAGGTTTTTCCGAATCAATCACTTTCCTATATCAAAAGCTTGATGAGGGGAACATCAATAATTCAGCATGGGCAGACTCAGAGTCGTCTCAAGGATCAAATCTTTATGTGTCTGATGACACTGATTTTTCCACCAGTGAACAAGGAGTAGGATCATCCGAAGGGGATTCATTTGAACTTGATCAGACAGGAATTCAAATAGTTGATATGTCAACAGTTGAAATCATTAATATGGATGAGATTGTTAAGGACGATGACACTTTTGTTGATAATAACGCAAAATGTGATTCACTTGATACCGTATGTTCTAGGAATGTAGACGTGGAAGATAGCAGCAAGCATAAATTCAGTTTTTCATGTGTCGATCTTCCATGCACGAAGGTTGAGAATTTGGTTTCTGAGACGTCAGAGTTTCTTGGCCAAGAACACTACTTGAGTTTTAAATCAGATTATAAAGCACATAAAAAGTCACATAGTTTGGATGATATCATCGACACTGTCGCAAGTGATTTCTTAAAGACACTGACATTGGGTAGTGATTCATTTCGTTCAAGTTGTGACGGTGATCCCCTGTCTCCTAGAGAGCAACTTTTAAGACAGTTTGAAGACGAGGCTCTAGCTTCAGGTAACTTCACTTTTGATTTCGATGCAAACGAGGAGGAATTGGGGGAAGATACACGTGGACATATTTTTGGGGATTGTGCTACGGATTCTGATTTATCTTTAATTATTTGCGCTGCCGAAGAGGAGTTTGAAAGGGAAAATCAGTCATTAATACAGAGAAGGAAGGCCAAAATTCTTGAAGATCTGGAGACTGATTCATTAATGCAAAAATGGGGTTTAGACGAGAGGGACTTTGAAAATTCTTCAAGAACATGGTCTGGTGGATTTGGAAGTCCAATTGAACTATCTGATGATGAACCATCCATATTACCTTCGATTGGAGAAGGGCTTGGTTCGTTTGTTCAAACTACAAGCGGAGGCTTTTTGAGGTCTATGTGTCCATCCCTCTTCAAAAATGTCAAGAATTGCGGGAACCTCATCCTTCAGGCTTCTAATCCGGTTGTTCTACCTGCGAAAATGGGCAGCGATATATTGGATATACTTCTAAACATGGCATCTGCTAGAGTCCAAGAGCTTTGTGATTATATCACTAAATTAATGCCTTTGCAAGATATCACTGGAAAATCAATTAAGCATATCGTGTCGGACACTGACACCAATACTGAAGCTCCCGGAAGGAGGGGATTGTGTGAGCATGATTTGTTTGAAGAATTTCCAAATAATTATTTAACAGACAAAGACAAGTGCTTGGACTCTGTGTCTCTAGAAGCTATAGCTCCTATGAGTATTGATAAGATTGAAGCCCTTTTAATAGAAGGGTTGAGAATTCAATCTGGTATGTCAAAAGAGGAGGCACCATCATGCATTCATTCCACTTATACAGAACACAATGAAGAAAGCGACAATGATCTTGATGGTTTAATGGGTCTGTCGGTAACATTGGATATGTGGTCGAGACTTGATTCTGGTATCATCCAAGGAGAACATAATTTGGAACGAATTTTGAAGATCCTTAAAGCACACAATTCTAAAATCACAGAATTCGATAATGAAGGGTTGAGAAATTGCCCGGATAAAACGAAAGTAGATGGCAGAAAGCACGGATATTTGGGAAACTACACGACAGTTGCTTTTATGATCCAGCATAGAGATTCTCTTAGAAATTACGAAGCAGTTGGTGTTCCAATGCTGGTTTTAACTCAGGTTGAAAGAGTTCTCACACATACAATGGAGAAAGAAACCCTTCAATCTAGATTCAAAATCAAGGAGATTCATCTTGCAGGAGTCCTTACCAAACCTGGAAAAAGGCAAGTCTGGGGCACGGCGTCCCAGCAACAATCGGGGTTACGATGGTTGCTTGCAAGTGGCATGTGTAGTAATGTCAAACACTCTTCTTCAAAATCAAAGGCGATTATCGTTAGATCACCTCCACTGTTTACAAACAAGCTAATGAATCAGGATATCTTTTGGAGCATTTCATGTGTTAAAGATAACATGGATACCAACACACACGTTAGGAATGTTGATATCATCTTCCCAAATTGA 3033 0.3953 MMMKPKFEFENESVTDLSNGHEELLNDIEELSKALYSNKAPIKPSIIASVRNNRSKSVEITRIPKPPPNSNPRFVSQDLLMEDKKLSSKWNWKKPLKALTLIGSQKFICRFSLHVHSIEGLPSSFDGVRLSVHWKRKNSILQTCPSRVLNGLAEFDETLIHRCTVHGSRTVSGHSVKYESKCFLIYASVVGEPEHNLGKHQVDLTRLLPRSLEDLWGNQSSGKWSTSFRLTGKALGARINVSFSYQVMKDELMGFGCHNVNVGNVINLKTGPSSADNVVGFSPNNRVIKLRRDQNDAVLSNEAVMNSGSGFSESITFLYQKLDEGNINNSAWADSESSQGSNLYVSDDTDFSTSEQGVGSSEGDSFELDQTGIQIVDMSTVEIINMDEIVKDDDTFVDNNAKCDSLDTVCSRNVDVEDSSKHKFSFSCVDLPCTKVENLVSETSEFLGQEHYLSFKSDYKAHKKSHSLDDIIDTVASDFLKTLTLGSDSFRSSCDGDPLSPREQLLRQFEDEALASGNFTFDFDANEEELGEDTRGHIFGDCATDSDLSLIICAAEEEFERENQSLIQRRKAKILEDLETDSLMQKWGLDERDFENSSRTWSGGFGSPIELSDDEPSILPSIGEGLGSFVQTTSGGFLRSMCPSLFKNVKNCGNLILQASNPVVLPAKMGSDILDILLNMASARVQELCDYITKLMPLQDITGKSIKHIVSDTDTNTEAPGRRGLCEHDLFEEFPNNYLTDKDKCLDSVSLEAIAPMSIDKIEALLIEGLRIQSGMSKEEAPSCIHSTYTEHNEESDNDLDGLMGLSVTLDMWSRLDSGIIQGEHNLERILKILKAHNSKITEFDNEGLRNCPDKTKVDGRKHGYLGNYTTVAFMIQHRDSLRNYEAVGVPMLVLTQVERVLTHTMEKETLQSRFKIKEIHLAGVLTKPGKRQVWGTASQQQSGLRWLLASGMCSNVKHSSSKSKAIIVRSPPLFTNKLMNQDIFWSISCVKDNMDTNTHVRNVDIIFPN* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0549 1010 Coils Coil 14 34 - -
Psa6g0549 1010 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 3 1010 IPR039614 -
Psa6g0549 1010 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 3 1010 IPR039823 -
Psa6g0549 1010 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 104 249 IPR019448 -
Psa6g0549 1010 ProSiteProfiles C2 NT-type domain profile. 99 247 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0549 Psa-Chr6 18218040 18221203 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0549 - - mtr:MTR_1g015120 1426.77