Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0523 ATGATAGCTTACCTTGAACACTTCGTTCATGGAAACGACACAGAATCATCTCCAAACGACGACGTTTCTTCCCTCCAAAGCTCTTTCCATTTCGCCCCAAACTCCATCGCCACCAAAGACTTCGGCGGCCTGAAATCCTCCAACCCCCTCGCCGTAATCCGTCCATACTCCACCGCCGACGTCGCGAGAGCCGTCAAAGCAGCAGCAACAACCACAAACCTAACAGTGGCCGCACGTGGGAATGGCCACTCCATTAACGGCCAAGCCATGGCAGAAAAAGGACTAGTCCTCGACATGCGCGCCACCGCGGAGGAACATTTCCAACTCCTCTATCTCGAAGGATTACCATACGTCGACGTTTCAGGAGGGGCATTATGGGAAGAAGTGTTGAAACGCTGCGTTTCGCAGTTTCAACTTGTTCCTAGATCGTGGACGGATTATCTCGGGCTAACGGTGGGTGGAACGCTCTCTAACGCCGGAGTTAGTGGGCAGACTTTCCGTTACGGTCCACAAACGGCAAACGTAACAGAATTAGAAGTCGTTACTGGGAAAGGTGAAAGCTTAGTTTGCTCCGAAAATCAAAATTCAGAGCTTTTTTTTGCAACGCTTGGTGGCCTCGGTCAGTTTGGTATCATCACTCGAGCTAGAATCATTCTTCAACAAGCCCCTGATATGGTGAGATGGATAAGGGTGATCTACTCGGAATTTGAGGACTTTACTAAAGATGCAGAGTGGCTGGTGACACTACCAGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGCTAATAATGATGACCCGTGTAATGGATGGCCCACAATTCCGATGGGTTCGAACCAAATCTTCGACCCGGTTCATCTTTCTCCTTCAGCCGGACCGGTTCTCTATTGCTTAGAACTCGCGCTTCACTATCGTAAAACCGCTCGCTCTTCCGAAGTTGACACGAAAGTGGATAGATTGCTTGGAGGGCTGAGATTTGTTGAGGGTGTAAAGTTTGAGGATGATGTGAAATATGTGGATTTTTTGTTACGTGTTAAGCGTGTGGAAGAGGATGCAAAAGCTAAAGGTATATGGGATGCACCTCATCCATGGTTGAACATGTTTGTGTCCAAATCCGACATTGGCGATTTTGATCGTGAAGTGTTCAAGAAAATCCTTAAACATGGGGTTGGTGGTCCCATTCTAGTCTATCCACTATTGCGAAGCAAGTAA 1218 0.4811 MIAYLEHFVHGNDTESSPNDDVSSLQSSFHFAPNSIATKDFGGLKSSNPLAVIRPYSTADVARAVKAAATTTNLTVAARGNGHSINGQAMAEKGLVLDMRATAEEHFQLLYLEGLPYVDVSGGALWEEVLKRCVSQFQLVPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTANVTELEVVTGKGESLVCSENQNSELFFATLGGLGQFGIITRARIILQQAPDMVRWIRVIYSEFEDFTKDAEWLVTLPEGDGFDYVEGFVVANNDDPCNGWPTIPMGSNQIFDPVHLSPSAGPVLYCLELALHYRKTARSSEVDTKVDRLLGGLRFVEGVKFEDDVKYVDFLLRVKRVEEDAKAKGIWDAPHPWLNMFVSKSDIGDFDREVFKKILKHGVGGPILVYPLLRSK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0523 405 Gene3D - 99 224 IPR016169 -
Psa6g0523 405 Pfam FAD binding domain 49 191 IPR006094 GO:0050660
Psa6g0523 405 SUPERFAMILY FAD-linked oxidases, C-terminal domain 223 405 IPR016164 GO:0003824|GO:0050660
Psa6g0523 405 Gene3D - 37 98 IPR016167 -
Psa6g0523 405 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 222 IPR016166 GO:0071949
Psa6g0523 405 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 223 405 IPR015345 GO:0009690|GO:0019139|GO:0050660
Psa6g0523 405 Gene3D - 226 405 IPR016170 -
Psa6g0523 405 PANTHER CYTOKININ DEHYDROGENASE 7 28 405 - -
Psa6g0523 405 SUPERFAMILY FAD-binding/transporter-associated domain-like 36 219 IPR036318 GO:0050660
Psa6g0523 405 PANTHER GULONOLACTONE OXIDASE 28 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0523 Psa-Chr6 17307320 17312533 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0523 K00279 - gmx:100783374 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0523 6 17307320 17312533 Psa6g0523 6 17307320 17312533 ECH