Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0517 ATGTCTTCAGTTTCTGTTTCAATGTCTTTACCACTAACCCAAGCCACACACAAAAGCCTCACCACACCCTTCTTGAAACCCTTACCCTTTCCACAAGCAAAGAAGACACTACTAGTCAACAATTCAACTTCAAAATCCAATCTTGTTGGAGTTCAAGCGTCATTGAAAGACCAAACAGTGAAGGGTCTAACAGCTTTTGCATTGACAGCTTCTATGGTCCTTCCAGATGTTGCCCATGCAGCTGGAAATGACTTTTCACCTTCTCTTAAAAACTTTTTACTTAGCATTGCTGCTGGTGGTGTTGTTCTTACAGCTATATTAGTTGCTGTTATTGGTGTTTCCAACTTTGATCCTGTTAAGAGAACTTGA 369 0.4038 MSSVSVSMSLPLTQATHKSLTTPFLKPLPFPQAKKTLLVNNSTSKSNLVGVQASLKDQTVKGLTAFALTASMVLPDVAHAAGNDFSPSLKNFLLSIAAGGVVLTAILVAVIGVSNFDPVKRT* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0517 122 Pfam Photosystem II reaction centre X protein (PsbX) 86 121 IPR009518 GO:0009523|GO:0015979|GO:0016020
Psa6g0517 122 Gene3D Single helix bin 85 122 - -
Psa6g0517 122 PANTHER OS07G0673550 PROTEIN 2 122 - -
Psa6g0517 122 PANTHER OS07G0673550 PROTEIN 2 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0517 Psa-Chr6 17062357 17062725 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0517 - - mtr:MTR_1g015290 199.904