Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0512 ATGGATTTCAGATTGATGGGTTTGGATGCTCCAGTATTGCATGTTCTACACCAAATGATGGACCTTTCAGACGACAACTCTTCCGACAAGTCATTATCACACAATGCTCCGACACAGTCCTACGTTAGAGACGCGAAGGCGATGGCTGCTACTCCGGCAGACGTGAAGGAGTATTCAAATTCGTATGTGTTCGTGATCGACATGCCAGGGTTGAAATCTGGTGACATAAAGGTTCAGGTGGAAGATGAGAATGTGCTAGTGATAAGTGGTGAGAGGAAGAGGGAAGAAGAGAAAGAAGGTGCAAAGTATTTGAGAATGGAGAGAAGAGTTGGAAAATTGATGCGAAAGTTTGTTCTTCCTGAGAATGCTAATACAGATGCTGTTTCGGCTGTGTGTCAAGATGGGGTTCTCAGTGTTACTGTTGAAAAATTGCCTCCGCCTCAGCCTAAGAAACCTAGAACTATTGAGGTTAAGATTGCTTGA 483 0.441 MDFRLMGLDAPVLHVLHQMMDLSDDNSSDKSLSHNAPTQSYVRDAKAMAATPADVKEYSNSYVFVIDMPGLKSGDIKVQVEDENVLVISGERKREEEKEGAKYLRMERRVGKLMRKFVLPENANTDAVSAVCQDGVLSVTVEKLPPPQPKKPRTIEVKIA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0512 160 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 44 158 IPR002068 -
Psa6g0512 160 PANTHER 17.1 KDA CLASS II HEAT SHOCK PROTEIN-LIKE 11 159 - -
Psa6g0512 160 SUPERFAMILY HSP20-like chaperones 32 152 IPR008978 -
Psa6g0512 160 Pfam Hsp20/alpha crystallin family 54 158 IPR002068 -
Psa6g0512 160 Gene3D - 10 159 IPR008978 -
Psa6g0512 160 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 11 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0512 Psa-Chr6 16883961 16884443 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0512 K13993 - gmx:100813195 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0512 6 16883961 16884443 Psa6g0512 6 16883961 16884443 ECH