Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0502 ATGGATTTCAGATTGATGGGTTTGGATGCTCCAGTGCTGCATGCTTTGCACCAAATGATGGACCTTTCAGACGACAACTCTTCCGACAAGTCATCATCACATAATGCTCCCACACGGTCGTACGTTAGAGATGCGAAGGCGATGGCTGCAACACCGGCGGACGTGAAGGAATATCCAAATTCATACGTGTTCTTGATCGACATGCCGGGGTTGAAATCCGGTGATATACAGGTTCAGGTTGAAGATGAGAATGTGCTAGTGATAAGTGGTGAGAGGAAGAGGGAAGAAGAGAAAGAAGGTGCTAAGTATTTGAGAATGGAGAGAAGAGTTGGGAAATTTATGCGCAAGTTTGTTCTTCCTGAGAATGCTAATACTGATGCTGTTTCGGCTGTGTGTCAAGATGGGGTGTTGACTGTTACGGTTGAGAAATTGCCTCCTCCTCAACCAAAGAAACCTAAGACTATTGAGGTTAAGGTCGCTTGA 483 0.4555 MDFRLMGLDAPVLHALHQMMDLSDDNSSDKSSSHNAPTRSYVRDAKAMAATPADVKEYPNSYVFLIDMPGLKSGDIQVQVEDENVLVISGERKREEEKEGAKYLRMERRVGKFMRKFVLPENANTDAVSAVCQDGVLTVTVEKLPPPQPKKPKTIEVKVA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0502 160 Pfam Hsp20/alpha crystallin family 54 158 IPR002068 -
Psa6g0502 160 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 44 160 IPR002068 -
Psa6g0502 160 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 9 159 - -
Psa6g0502 160 SUPERFAMILY HSP20-like chaperones 33 152 IPR008978 -
Psa6g0502 160 Gene3D - 10 159 IPR008978 -
Psa6g0502 160 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0502 Psa-Chr6 16691919 16694650 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0502 K13993 - egt:105977211 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0502 6 16691919 16694650 Psa6g0502 6 16691919 16694650 ECH