Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0501 ATGGATTTCAGATTGATGGGTTTGGATGCTCCAGTATTGCATGCTCTACACCAAATGATGGATCTTTCAGACGACAATTCTGTGGACAAGTCATCACACAATGCTCCGACACGGTCATACGTTAGAGATGCAAAGGCGATGGCTGCAACTCCGGCGGACGTGAAGGAAAATCCAAATTCATACGTGTTTGTTATCGACATGCCAGGGTTGAAATCTGGTGATATAAAGGTTCAGGTGGAAGATGAGAATGTGCTTGTGATAAGCGGTGAGAGGAAGAGGGAAGAAGAGAAAGAAGGTGCAAAGTATTTGAGAATGGAGAGAAGAGTTGGAAAATTGATGCGAAAGTTTGTTCTTCCTGAGAATGCTAATACATATGCTGTTTCGGCTGTGTGTCAAGATGGGGTTCTCAGTGTTAATGTTGAAAAATTGCCTCCGCCTCAGCCTAAGAAACCTAGAACTATTGAGGTTAAGATTGCTTGA 480 0.4313 MDFRLMGLDAPVLHALHQMMDLSDDNSVDKSSHNAPTRSYVRDAKAMAATPADVKENPNSYVFVIDMPGLKSGDIKVQVEDENVLVISGERKREEEKEGAKYLRMERRVGKLMRKFVLPENANTYAVSAVCQDGVLSVNVEKLPPPQPKKPRTIEVKIA* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0501 159 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 157 IPR002068 -
Psa6g0501 159 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 10 158 - -
Psa6g0501 159 Pfam Hsp20/alpha crystallin family 53 157 IPR002068 -
Psa6g0501 159 PANTHER 17.1 KDA CLASS II HEAT SHOCK PROTEIN-LIKE 10 158 - -
Psa6g0501 159 SUPERFAMILY HSP20-like chaperones 18 151 IPR008978 -
Psa6g0501 159 Gene3D - 10 158 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0501 Psa-Chr6 16676539 16677898 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0501 K13993 - gmx:100813195 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0501 6 16676539 16677898 Psa6g0501 6 16676539 16677898 ECH