Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0490 ATGAAAAAATTTGCAGCACCACTATTACTTATGATGATTTCTCTGCTTGTTTTTGTAATGGTTTCTTTTCTGTTAAACAGTAGAAATGGAATTGAAGCATCAGCAGATAGTAACAATATTGATCATGTCAGGTTCAAGGTAACTGATGAACAACCTTACAGAACTTCTTATCACTTTCAGCCTCCGCAAAATTGGATGAACGATCCAAATGCTCCTATGTACTACAAAGGTGTTTATCACTTTTTCTACCAACATAATCCATATGCAGCAACATTTGGCGATAAGATCATATGGGCTCATTCAGTATCCTCTGATCTCATCAATTGGATTCATCTCAATAATGCTCTTGAACCAAGTGAGCCTTATGACATCAACAGTTGTTGGTCAGGTTCAGCCACTATACTCCCGGGTGAAAAACCTGTTATTCTTTACACAGGAATCGATCACAATAAACATCAAGTTCAAAACTTAGCTACGCCAAAGAATCTATCAGATCCTTTCTTAAGAGAATGGACAAAACACCCTCAAAATCCTTTGATCACTCCACCTAATGAGGTCGAAGAGGATGAGTTCAGAGACCCTACAACTGCTTGGCATGGAAAAGATGGAAAATGGAGAGTAATCATCGGTGCTCAAAAGGGCAATAAAGGAAAAGCTATTCTTTACCAAAGTGAGGATTTTGTTAATTGGACAGTGAGTCCAAAACCTTTTTTTGCAACAGATAATACTCGAGTTATTGAATGTCCGGATTTTTTTCCCGTGTCTATCAATAGCACAAATGGGGTTGATACATCTGTGGAAAATTCAAGTGTTAGACATGTTTTGAAGATAAGCTATCAAAGCAAACAACATGACTATTACTTTCTCGGTAAATACGTATCTGATAAGGAAAACTTTGTTCCCGATGAAAAATTTACAGGAACTAGTAAAGATTTAAGGTTTGACTATGGTAAATTTTACGCTTCAAAGTCATTTTTTGACTATGCTAAGAATAGAAGAATACTATGGGGATGGGTGAATGAGTCTGACACTACACAAGATGATATTGAGAAAGGATGGGCAGGTTTACAGACAATTCCAAGGAAAGTTTGGCTTGATAAAAGTGGAAATAGATTAATGCAGTGGCCGATTGAAGAGGTAGAAAATTTAAGAGGCTCGAAAATCAGTATTACTGGAAAGAAACTTGAGGGTGGATCAACTCTTGAAGTCTCGGGCATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTCCCTGATCTAGAAAGTGGCGAGTTGTTAGAAGATCCGAGTGAAGTTGATCCTCAACTATTATGTAGCAAACCATATGCATCAAGAAATGGACAAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCTCACAGAGCAAACTGCAGTGTTTTTCCAAATATATAAAACTCCAAATAGATATTTATGTCTGATGTGCAGTGACCATAGCAGGTCTTCATTGCGACAAGATCTTGATAAAACCACATATGGAACATTCTTTGACATAGATCCCAATCTCAAAGAGATTTCACTTAGAAGCTTGATTGACAAGTCCATTATTGAGAGTTTTGGAGATGAAGGAAGAGCTAGCATAACAAGTAGAGTTTATCCATTATTGGCTATAAAGAGAGATGCACATCTTTATGTATTCAACAATGGAAGCCAAAGTGTGATTATTTCAAAACTTAATGCTTGGAGCCTGAAGCAAGCAGAGATAGGCCTCGAGGGAAGTATAAGATGTGCCTAA 1767 0.3752 MKKFAAPLLLMMISLLVFVMVSFLLNSRNGIEASADSNNIDHVRFKVTDEQPYRTSYHFQPPQNWMNDPNAPMYYKGVYHFFYQHNPYAATFGDKIIWAHSVSSDLINWIHLNNALEPSEPYDINSCWSGSATILPGEKPVILYTGIDHNKHQVQNLATPKNLSDPFLREWTKHPQNPLITPPNEVEEDEFRDPTTAWHGKDGKWRVIIGAQKGNKGKAILYQSEDFVNWTVSPKPFFATDNTRVIECPDFFPVSINSTNGVDTSVENSSVRHVLKISYQSKQHDYYFLGKYVSDKENFVPDEKFTGTSKDLRFDYGKFYASKSFFDYAKNRRILWGWVNESDTTQDDIEKGWAGLQTIPRKVWLDKSGNRLMQWPIEEVENLRGSKISITGKKLEGGSTLEVSGITASQADVEVLFELPDLESGELLEDPSEVDPQLLCSKPYASRNGQIGPFGLLALASKDLTEQTAVFFQIYKTPNRYLCLMCSDHSRSSLRQDLDKTTYGTFFDIDPNLKEISLRSLIDKSIIESFGDEGRASITSRVYPLLAIKRDAHLYVFNNGSQSVIISKLNAWSLKQAEIGLEGSIRCA* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0490 588 ProSitePatterns Glycosyl hydrolases family 32 active site. 58 71 IPR018053 GO:0004553|GO:0005975
Psa6g0490 588 Gene3D Glycosyl hydrolase domain; family 43 63 389 IPR023296 -
Psa6g0490 588 CDD GH32_Fruct1-like 64 365 - -
Psa6g0490 588 Gene3D - 390 574 - -
Psa6g0490 588 SUPERFAMILY Concanavalin A-like lectins/glucanases 376 576 IPR013320 -
Psa6g0490 588 Pfam Glycosyl hydrolases family 32 N-terminal domain 58 376 IPR013148 -
Psa6g0490 588 Pfam Glycosyl hydrolases family 32 C terminal 379 573 IPR013189 -
Psa6g0490 588 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 47 581 - -
Psa6g0490 588 SUPERFAMILY Arabinanase/levansucrase/invertase 50 377 IPR023296 -
Psa6g0490 588 SMART glyco_32 58 534 IPR001362 GO:0004553|GO:0005975
Psa6g0490 588 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 47 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0490 Psa-Chr6 16160253 16164723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0490 68 579 Glycoside Hydrolase AT1G55120 56.897 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0490 K01193 - gmx:100777487 915.22