LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa6g0471	ATGAGGGAAGAAATTAGCAATAACCCATCAGAGAACAAGTCCAAAGCTTCTAAATTTTCCGATCAAAATCAACCACCAAAGCTTCAACCTGCAAAAACAACCAACCCCAACAACAATCACTCAAAACCAAGGTTATGGGGTGCACACATTGTCAAAGGCTTTTCAGCTGACAAGAAAACCAAACAACAATCATCTCTTCCGACAAAAAAAACAACAACCTCGGATAATGCTAACCAGAAGAACCCTTTTGTTCCACCTCATTCCAGAGCGAAAAGATCCTTAATGGGTGATTTGTCATGTTCTCAGGTTCATCCACATGCTTTTCCGACACATAGGAGACAATCATCGACTGATTTGTTCACGGAGTTGGATCATATGAGAAACTTGTTGCAAGAGTCTAAAGAGAGGGAGAGTAAGCTGAATGCTGAGTTGGCTGAGTGTAGGAAGAACCGGAATGAGGTTGATGAGCTTGTGAAAAAAGTTGCTTTGTTGGAAGAAGAGAAAGCTAGTCTTTTTGAGCAATTGGCTGTATTGAGTAGGAGCTGTGGATTGGAGAGACAAGAGGAAGTGGTGAAAGGGGGAAATGAGGATAGTTCTATGCAGAATCTTGAGCTTGAAGTTGTTGAGTTGAGAAGGTTGAATAAGGAGCTGCATATGCAGAAGAGGAACCTCACTTGCAGGTTATCTTCTATGGAGTCTGAATTGTCTAGCTCTGCAAACTCTTCTGAGAGTGACATTGTTGCCAAATTCAAAGCCGAGGCGTCATTGCTCCGGCTCACGAATGAAGACCTGAGTAAACAAGTAGAAGGTTTACAAACAAGCAGATTAAATGAGGTGGAGGAGCTAGCCTACTTGAGGTGGGTGAATTCGTGTTTACGAACCGAGTTGAAGAATACATGCTCAACATTGGATTCTGATAAGCCATCTAGTCCTCAATCTGTGGTGAGTAGTAGTGGAGATTCTATTATTTCTTTCTCTGATCAATGTGGTAATGCAAATAGCTTCAATTTGGTTAAGAAGCTGAAAAAGTGGCCAATAACTAGTAGTGATAATTTGTCACAAGTTGAGTCCACAAGTAGTACTAGTAGTAGTCTCTTTGAGAAAAATTGGATTGAATCAATATCTGAGGGAAGCAATAGAAGAAGACATTCAATTAGCGGTTCCAATAGCTCAGAGGAAGATGTTGTTGTATTGAATAAAAGAAGACAATCTAATTGTTTTGATTCTCTTGAATGTTTAAAAGAAATCGAAAAGGAATCGGTGCCATTGCCGTCGTTGTTTGTTCAGCAATCTGTTATGGAGAAAAGGCCACTGAGGGTTCCCAATCCTCCTCCAAGACCTTCTTCATGTTCTATTTCTAGCAAAACAAAACAAGAAAACTCAGCTCAAGTTCAAGTTCAACCTCCTCCACCTCCGCCTCCTCCACCACCTCCTATGAGTTTTGCCTCAAAAAGTAACACGGCGATGGTAAAAAGAGCACCACAAGTGGTGGAATTGTACCATTCACTCATGAAGAGAGATTCTAGAAAGGATTCTTCAAACGGAGGACTCGCTGATGCTCCTGATGTTGCTGATGTTCGTAGTAGCATGATTGGAGAAATTGAGAACCGTTCATCGCATTTACTTGCTATAAAGGAAGATATTGAAACACAAGGAGAATTCGTAAATTCGCTGATTAGAGAGGTGAACAATGCGGTTTATCAGAACATTGATGATGTTGTAGCATTTGTGAAGTGGCTTGATGATGAACTTTGCTTCCTTGTGGACGAAAGGGCCGTCCTTAAGCATTTCGATTGGCCGGAGAAAAAAGCTGACACATTAAGAGAAGCATCATTTGGATACCAAGATTTGAAAAAATTGGAATGTGAAGTTTCCTCCTACAAGGACGATCCTCGGCTACCTTGTGATATTGCTCTAAAGAAAATGGTTGCTTTATCAGAAAAGATGGAACGCACGGTTTATGCTCTTCTCCGCACGAGGGACTCACTAATGCGAAATTGCAAGGAGTTTCAAATTCCTGTAGAATGGATGCTTGATAATGGAATTATTGGCAAGATAAAACTCGGGTCTGTTAAATTGGCGAAAAAGTATATGAAAAGGGTAGCCATGGAAGTTCAAACAAAGTCAGCATTCGACAAAGATCCTGCAATGGATTACATGGTTCTCCAAGGAGTGAGATTTGCTTTCAGAATCCATCAGTTTGCAGGAGGATTTGATGCAGAAACAATGCACGCGTTTGAGGAACTTCGCAATCTTGCTTCTCTACTAAACAAGACATGA	2280	0.4092	MREEISNNPSENKSKASKFSDQNQPPKLQPAKTTNPNNNHSKPRLWGAHIVKGFSADKKTKQQSSLPTKKTTTSDNANQKNPFVPPHSRAKRSLMGDLSCSQVHPHAFPTHRRQSSTDLFTELDHMRNLLQESKERESKLNAELAECRKNRNEVDELVKKVALLEEEKASLFEQLAVLSRSCGLERQEEVVKGGNEDSSMQNLELEVVELRRLNKELHMQKRNLTCRLSSMESELSSSANSSESDIVAKFKAEASLLRLTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRTELKNTCSTLDSDKPSSPQSVVSSSGDSIISFSDQCGNANSFNLVKKLKKWPITSSDNLSQVESTSSTSSSLFEKNWIESISEGSNRRRHSISGSNSSEEDVVVLNKRRQSNCFDSLECLKEIEKESVPLPSLFVQQSVMEKRPLRVPNPPPRPSSCSISSKTKQENSAQVQVQPPPPPPPPPPPMSFASKSNTAMVKRAPQVVELYHSLMKRDSRKDSSNGGLADAPDVADVRSSMIGEIENRSSHLLAIKEDIETQGEFVNSLIREVNNAVYQNIDDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREASFGYQDLKKLECEVSSYKDDPRLPCDIALKKMVALSEKMERTVYALLRTRDSLMRNCKEFQIPVEWMLDNGIIGKIKLGSVKLAKKYMKRVAMEVQTKSAFDKDPAMDYMVLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT*	760

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa6g0471	759	MobiDBLite	consensus disorder prediction	1	88	-	-
	Psa6g0471	759	Coils	Coil	123	181	-	-
	Psa6g0471	759	MobiDBLite	consensus disorder prediction	10	42	-	-
	Psa6g0471	759	Coils	Coil	200	234	-	-
	Psa6g0471	759	MobiDBLite	consensus disorder prediction	377	396	-	-
	Psa6g0471	759	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	468	575	-	-
	Psa6g0471	759	MobiDBLite	consensus disorder prediction	434	474	-	-
	Psa6g0471	759	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC-LIKE	1	759	-	-
	Psa6g0471	759	MobiDBLite	consensus disorder prediction	449	464	-	-
	Psa6g0471	759	MobiDBLite	consensus disorder prediction	57	83	-	-
	Psa6g0471	759	MobiDBLite	consensus disorder prediction	380	394	-	-
	Psa6g0471	759	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC	1	759	IPR040265	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa6g0471	Psa-Chr6	15647492	15651741	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa6g0471	-		-	mtr:MTR_1g016290	1170.22