Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0468 ATGGAACGTGCTCGTAGACTCGCAAACCGTGCAACTCTGAAGCGTCTTCTTTCAGAGGCGAAACAGAACCGGAAGACTGAATCAACATCAACAACAACAACAACGCCGCTTCCTTTTTCACTCTCTGGTTCATCTTCAAGGTACGTTTCCTCTGTTTCAAACTCTATTCTTAGAGGCAGAGGATCCAAACCAGACAACAATGTTTCACGACGTGTTGGTGGGTTTCTTGGTGTTGGTTATCCATCACAATCTCGATCCATCTCCGTTGAAGCGTTGAAACCGAGTGACACATTTCCGAGACGCCATAACTCAGCAACACCGGATGAACAAACGAAAATGGCTGAATCGGTTGGTTTCGATACGCTTGATTCACTCGTTGATGCAACCGTGCCGAAATCCATTCGGTTGAAGGAAATGAAGTTCAATAAATTTGATGGTGGATTGACAGAAGGTCAAATGATTGAGCACATGAAGGATTTAGCTTCGAAAAACAAGGTTTTCAAATCGTTTATTGGTATGGGATACTATAACACTCATGTTCCACCTGTGATTTTGAGGAACATCATGGAGAATCCTGCTTGGTATACACAGTATACACCTTATCAAGCTGAGATATCTCAAGGCCGTCTTGAATCTTTGTTGAATTTTCAGACCATGATTACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGTACTGCTGCTGCGGAAGCAATGTCTATGTGTAATAATATTCAAAAGGGTAAGAAGAAAACTTTCATTATTGCTAGTAATTGTCATCCACAAACCATTGATATATGTCAGACGAGAGCCGATGGATTTGAACTCAAGGTTGTGGTGAAAGATCTTAAGGATATTGATTACAAATCTGGTGATGTTTGTGGTGTTCTTGTTCAGTATCCTGGTACTGAAGGTGAGGTTTTGGATTACGGTGAATTTATTAAGAAGGCTCATGCTAACGAGGTTAAGGTTGTTATGGCGAGTGATCTGTTGGCATTGACTGTGTTGAAACCTCCGGGTGAGTTTGGAGCTGATATTGTTGTTGGTTCAGCTCAGAGATTTGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCTTTCTTGGCTACTTCGCAAGAGTATAAGAGGATGATGCCTGGAAGAATCATCGGTGTTAGTGTTGATTCTTCTGGAAAGCAAGCTTTGAGGATGGCTATGCAAACTAGGGAGCAGCATATCCGTAGGGACAAGGCCACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTATATCATGGACCCGAAGGCCTTAAAGCCATTGCACAAAGGGTTCATGGTCTTGCTGGTGTGTTTGCTCTTGGATTAAAGAAACTTGGGTTGGAAGTTCAGGATCTTGGCTTCTTTGACACTGTGAAGGTTAAGACTTCAAATGCCAAAGCAATTGCAGATGCTGCTATCAAAAGTGAAATCAATTTGCGTGTTGTAGATGGAAACACTATCACCGCTGCTTTTGACGAAACAACCACGTTAGAGGATGTTGATAAGCTTTTCAAAGTTTTCGCTGGTGGCAAGCCTGTCTCATTCACAGCGGCCCCATCTCTTGCACCAGAGTTTCAAAATGCAATTCCTTCTGGATTAGTTAGGGAGAGTCCCTATTTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTGAGATACATTCATAGGTTACAATCAAAAGATCTCTCACTTTGCCACAGTATGATCCCACTTGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCCGTGACATGGCCTAGCTTTACCGATTTGCACCCTTTCGCACCAACTGAACAGGCTCAAGGGTATCAGGAAATGTTCAACAATTTGGGTGACCTGTTGTGTACCATCACTGGATTTGACTCCTTCTCTTTGCAACCAAATGCCGGTGCTGCCGGAGAATATGCCGGACTCATGGTTATTCGTGCATATCATTTGTCAAGAGGTGACCACCACCGCAATGTTTGCATTATACCAGCATCAGCACATGGTACAAATCCTGCTAGTGCTGCTATGGTTGGAATGAAAATTGTTACCATAGGAACTGATGCTAAGGGAAACATTAACATTGAAGAGTTGAAGAAGGCTGCTGAAAAACATAAGGACAACTTATCTGCATTTATGGTAACATATCCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGATATTTGCAAGATTATCCATGATAATGGTGGTCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTAGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATTCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACCTGGCACCATTTTTACCCTCACACCCCGTGGTGCCAACCGGTGGAATTCCTGCACCTGAGAATCCTCAACCACTTGGTAGTATCTCAGCTGCACCTTGGGGATCAGCACTCATATTGCCAATCTCTTACACATACATAGCCATGATGGGTTCTCAAGGACTCACTGACGCGTCAAAGATAGCCATTTTGAATGCAAACTACATGGCGAAACGATTGGAGAGTTATTACCCAGTTCTTTTCCGCGGAGTCAATGGAACAGTTGCTCATGAATTCATTATTGACTTAAGAGGATTTAAGAATACTGCTGGAATAGAGCCTGAAGATGTTGCGAAACGTCTCATGGACTATGGATTTCATGGACCAACAATGTCATGGCCTGTCGCTGGTACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGCGATGCTCTTATTTCCATTAGAAAGGAAATTGCTGAGGTTGAGAAAGGAAATGCTGATGTTCACAACAATGTTCTCAAGGGAGCCCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACCAAACCATACTCCAGGGAGTATGCAGCCTTCCCAGCTGCATGGCTCCGTGGTGCAAAGTTTTGGCCTACCACAGGACGTGTTGATAATGTGTATGGTGACCGCAACCTGGTTTGCACCCTTCTCCCAGCATCACAGGCCGTTGAAGAACAAGCTGCTGCAACTGCATAA 3177 0.4391 MERARRLANRATLKRLLSEAKQNRKTESTSTTTTTPLPFSLSGSSSRYVSSVSNSILRGRGSKPDNNVSRRVGGFLGVGYPSQSRSISVEALKPSDTFPRRHNSATPDEQTKMAESVGFDTLDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICQTRADGFELKVVVKDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHANEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGLEVQDLGFFDTVKVKTSNAKAIADAAIKSEINLRVVDGNTITAAFDETTTLEDVDKLFKVFAGGKPVSFTAAPSLAPEFQNAIPSGLVRESPYLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDLHPFAPTEQAQGYQEMFNNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPASAHGTNPASAAMVGMKIVTIGTDAKGNINIEELKKAAEKHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGTLMIEPTESESKAELDRFCDALISIRKEIAEVEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLVCTLLPASQAVEEQAAATA* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0468 1058 Gene3D - 181 441 IPR015421 GO:0003824
Psa6g0468 1058 Gene3D - 609 835 IPR015421 GO:0003824
Psa6g0468 1058 Coils Coil 717 737 - -
Psa6g0468 1058 CDD GDC-P 150 526 IPR020581 GO:0004375|GO:0006546
Psa6g0468 1058 TIGRFAM gcvP: glycine dehydrogenase 101 1042 IPR003437 GO:0004375|GO:0006544
Psa6g0468 1058 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1058 IPR020581 GO:0004375|GO:0006546
Psa6g0468 1058 MobiDBLite consensus disorder prediction 23 44 - -
Psa6g0468 1058 CDD GDC-P 570 965 IPR020581 GO:0004375|GO:0006546
Psa6g0468 1058 SUPERFAMILY PLP-dependent transferases 101 526 IPR015424 -
Psa6g0468 1058 SUPERFAMILY PLP-dependent transferases 546 1043 IPR015424 -
Psa6g0468 1058 MobiDBLite consensus disorder prediction 18 44 - -
Psa6g0468 1058 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 92 1049 IPR003437 GO:0004375|GO:0006544
Psa6g0468 1058 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1058 - -
Psa6g0468 1058 Pfam Glycine cleavage system P-protein 101 526 IPR020581 GO:0004375|GO:0006546
Psa6g0468 1058 Pfam Glycine cleavage system P-protein 544 820 IPR020581 GO:0004375|GO:0006546
Psa6g0468 1058 Gene3D Aspartate Aminotransferase, domain 1 857 996 IPR015422 GO:0003824
Psa6g0468 1058 Gene3D Aspartate Aminotransferase, domain 1 170 522 IPR015422 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0468 K00281 - gmx:100819714 1882.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0468 6 15611251 15618329 Psa6g0468 6 15611251 15618329 ECH