Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0266 ATGGCACTGAACGATTTCTTCGCCGGCGAGATAGCGACGGAGCTTCTCAAAATGCTCATAACCATATCTCGAAAGTCTCTTCTATGCAGAGCAAGCGCAGAACAACTCAAATCTTGCATCAACGAAATCCTCCCCACAATACAAGAAATCAAATACACCGGCGTCGAGTTACCGGAGCAAAGACAGTTTCAGCTCGACCGTTTCTCGGAGATTCTCCGTTCAGGCGTGGAACTCTCTCAAAAAGTCCTCTCCTCAAGCCGGTGGAACGTGTACAAGAATCTCCAGCTAGCAAAGAAAATGGAGAAGCTTGAGAAGAACGTTTCACGGTTCGTGCAAGGTCCCATGCAGGCTCATATATTGGCTGACGTGCATCACGTGCGGTTCGAGATGGCGGAACGGTTCGACCGAGTGGACGCGTCGAATAGGAAGCTGGAGAAGTATTTTGGTGCTATGAAGATTGGTGTTGGAGGTGGAGGGTGGGTGGAGGAAGCTGTGAGGTCTTGTATGGAGGAAGATGAGAATTGGGTTGAGGGTAATTGTGGAAATTTGAATTTGAGTATTGGTTTGGATTTGGGGAAGAAGAAAGTTATAGAGAAAGTTATTGGAAGAGAGGATTTATGGGTTGTTGGGGTTTGTGGGATTGGTGGATCTGGGAAAACTACTCTTGCTAGAGAGGTTTGTAGAGATGAACAAGTTAAATGTTATTTTAAGGAGAGAATCTTGTTTCTAACTGTTTCACAATCTCCAAATGTGGAGCAGCTAAGGACAAAGATTTGGGGACACATCATGGGAAACAGAAACTTGAATCCAGATTATGCGGAGAGAGAAAGTAGAGTAAACAAAGCAAACTTGCAACCTTGGTTTCATAACAAGCTGTTGCAAGGAACTGAGAGTGGACCAAGACATCGTCTAGAAGCAACCAACCTAAGGACAAAGATTTGGGGACACATCATGGGAAACAGAAACTTGAATCCAGATTATGCGGTTCCTCAATGGATACCACAATTTGAATGCAGAAGTGAAGCTAGAACGTTGGTTGTTCTAGACGATGTTTGGTCACTCTCAGTTCTTGAACAGCTTGTGTATAGAATACCAGGTTGCAAGTTTGTTGTGGTTTCTAGGTTCAAATTTCCAACAATATTCAATGAAACTTATGAGGTTGAATTGTTGAGTGAAGAGGATGCTTTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCGATTCCTTTTACAGCTAATGAGAATTTGGTTAAACAGGTTGTGAGTGAGTGCGAAAAGCTTCCATTGGCGCTAAAAGTGATCGGAGCTTCGTTGAGAGATCAAACCGAAATGTTTTGGGAAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGAGAATCTCATGAAATCAACCTGATTGAAAGAATGGCGATAAGTATAAACTACTTAAGAGAAGAGATCAAGGAATGTTTCTTGGACTTGTGTTCATTCCCCGAGGATAAAAAAATCCCTCTAGATGTTCTCATCAATATGTGGGTCGAAATCCATGATATTGATGAGAAAGATGCTTTTGCTATTGTTGTTGAGCTCTCTAACAAAAATCTTCTCACCTTGGTGAAAGAAGCACGTGCTGGTGGCATGTATAGTAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTTAGAGACCTTGCACTTAATTTGAGTAACCGCGAGACCATTAATGAACGCCGGCGATTAGTTATGCCAAAACGAGAGAACGGGCTCCCCAGAGAATGGATGAGACGCAAACACAAACCATTCGAGGCACAAATTGTTTCAATTCACACAGGCGAAATGAAGGAAATGGATTGGCCTAAACTTGAATTTCCAAAAGCTGAAGTGCTGATTATAAATTTTACATCCAAGAATTACTTTTTACCTCCTTTCATAGATAAAATGCCAAATTTAAGAGCATTAATAGTAATAAACTATAGTGCATCCTATGCTTGTCTTCACAATGTTTCAGTTTTCAACAATTTGGCAAACTTGAGAAGCCTATGGCTTGAAAAAGTTTCCATCCCTCAATTTGGAGGCATTGTCATGGAAAACTTAGGCAAGTTATTTATAGTCTTGTGTAAGATTAACAACAATCTAGAGGGTAAAGAGGTAAACCTGTCTCGAATCTTTCCTAACCTCTCTGAGATCACTCTTGATCATTGTGATGATGTAACTTCTTTGCCCTCAAGCATTTGTAGGATACAATCTCTCAAAAACATGAGTCTCACCAATTGCCACAATTTGGCACAACTTCCTGCTGAATTAGGCGCGCTGAGATCTCTCGAGATTCTTCGGTTATACGCTTGTCCGAAATTGAAAATGCTTCCTCCTAGCGTCTGCGACATGATTAGATTGAAGTATATCGATGTTTCGCAATGTGTTTACTTGTCATGTTTTCCTGAAGAGATTGGAAAATTAGCAAGTTTGGAAAAGATTGACATGAGGGAATGCTGCATGATTAAGAATGTGCCTCAATCTGCTATTTTGTTGAAGTCTTTGAGGCTTGTAATTTGTGATGAGGAAGTGTTTGGTATGTGGAAAGATGTTGAGAAGGCCAAGCCTAATGTTCATGTTCAAGTGTCAGAACAGTACTTTGATTTGGAATGGCTTAGAGAATGA 2649 0.4096 MALNDFFAGEIATELLKMLITISRKSLLCRASAEQLKSCINEILPTIQEIKYTGVELPEQRQFQLDRFSEILRSGVELSQKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFVQGPMQAHILADVHHVRFEMAERFDRVDASNRKLEKYFGAMKIGVGGGGWVEEAVRSCMEEDENWVEGNCGNLNLSIGLDLGKKKVIEKVIGREDLWVVGVCGIGGSGKTTLAREVCRDEQVKCYFKERILFLTVSQSPNVEQLRTKIWGHIMGNRNLNPDYAERESRVNKANLQPWFHNKLLQGTESGPRHRLEATNLRTKIWGHIMGNRNLNPDYAVPQWIPQFECRSEARTLVVLDDVWSLSVLEQLVYRIPGCKFVVVSRFKFPTIFNETYEVELLSEEDALSLFCHHAFGQKSIPFTANENLVKQVVSECEKLPLALKVIGASLRDQTEMFWESVKNRLSQGQSIGESHEINLIERMAISINYLREEIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRETINERRRLVMPKRENGLPREWMRRKHKPFEAQIVSIHTGEMKEMDWPKLEFPKAEVLIINFTSKNYFLPPFIDKMPNLRALIVINYSASYACLHNVSVFNNLANLRSLWLEKVSIPQFGGIVMENLGKLFIVLCKINNNLEGKEVNLSRIFPNLSEITLDHCDDVTSLPSSICRIQSLKNMSLTNCHNLAQLPAELGALRSLEILRLYACPKLKMLPPSVCDMIRLKYIDVSQCVYLSCFPEEIGKLASLEKIDMRECCMIKNVPQSAILLKSLRLVICDEEVFGMWKDVEKAKPNVHVQVSEQYFDLEWLRE* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0266 882 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Psa6g0266 882 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 307 879 - -
Psa6g0266 882 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 274 - -
Psa6g0266 882 Gene3D - 186 379 IPR027417 -
Psa6g0266 882 Gene3D - 389 471 IPR042197 -
Psa6g0266 882 PRINTS Disease resistance protein signature 208 223 - -
Psa6g0266 882 PRINTS Disease resistance protein signature 425 439 - -
Psa6g0266 882 PRINTS Disease resistance protein signature 742 758 - -
Psa6g0266 882 Pfam NB-ARC domain 342 469 IPR002182 GO:0043531
Psa6g0266 882 Pfam NB-ARC domain 194 276 IPR002182 GO:0043531
Psa6g0266 882 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Psa6g0266 882 Gene3D - 472 561 IPR036388 -
Psa6g0266 882 Gene3D Ribonuclease Inhibitor 583 863 IPR032675 -
Psa6g0266 882 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 274 IPR044974 GO:0006952
Psa6g0266 882 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 307 879 IPR044974 GO:0006952
Psa6g0266 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 490 IPR027417 -
Psa6g0266 882 SUPERFAMILY L domain-like 619 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0266 Psa-Chr6 8068039 8071771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0266 656 859 Receptor kinase-like Gene Family AT5G27060 27.488 6.25e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0266 - - gmx:100816846 1227.62