Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0205 ATGGCTGTCATTGGCACCACCGCAACTACCGATGTGGGCACCGCTGGCAGTAGAGCAAAAATACTTGTTCCAGATTTTCATCAAAGCGTGAAACTAAAGTATGTCAAGTTAGGTTACCACTACTTAATCTCAAATCTCTTTAGTCTATCTTTTATCCCGTTAATCATAATCACTTTAATCCACTTCTTCCAAACACAAAACCTAAACCAGCTCTGGCTTCTTCACGACCACTACAATCTCATCCGTATGCTCACTTTCACCGGTTTCATAGTCTTCGCTTTCACTCTCTGTGTTCACAAGCGCCAACGCGCCGTCTACCTCGTCGACTTCTCTTGTTTCCGTCCCGCGGATCACCTCAAAGCTCCATTCCACAGCTTCATCCAACATTCTCATCTCACCGGCGACTTCGACGATTCCTCTTTGGATTTCCAGCGCAAGATTCTTCTCCGTTCCGGTCTCGGCGACGAAACCTTTCCCGAAGCCATGCATTACATCCCTCCCCGTCCTTCAATCTCTGCGGCGAGATGCGAAGCAGAATCCGTCATGTTTGGTGCCCTGGAGAATCTTTTTGTCAACACAAACCTAAATCCAAAAGAAATTGGAATTCTCGTTGTGAATTGTAGTTTGTTTAACCCTACACCTTCCCTTTCTTCAATGATTGTTAATAAATATAACCTGAGAAGTAACATTATGAGTTTCAATTTAGGTGGAATGGGTTGTAGTGCTGGTGTTATAGCTATTGATCTTGCAAGAGATTTGTTGAGGGTTCAAAAGGATAATACTTATGCCGTTGTTGTTAGCACTGAAAATATTACTCAGAATTGGTACTTTGGGAATAAAAAATCAATGCTTATACCTAACTGTTTGTTTAGGGTTGGTGGTTCAGCTGTGTTGCTATCGAATAAATCTGCTGATAGAACGAGGGCTAAGTATAAGCTTGTTCATGTTGTGAGGACCCACTGCGGTGCAGACGATAAGGCCTTTCGATGTGTTTATCAGGAAGAAGATGCTCTAGGGAAAACCGGTGTTTCGTTGTCGAAAGACTTGATGAGAATTGCTGGCTTGTCATTGAAAACCAATATTACTACACTTGGTCCTTTGGTGCTTCCGGTTACTCAGCAACTTAGGTTCTTTGCTAATTTGGTTTTTAGCAAGATTTCTAAAAGTGATGCGAAGATTTATATACCAGATTTCAAACTCGCATTCGATCATTTCTGTATACATGCTGGTGGAAGGGCTGTGATTGATGAGTTGGAGAGGAATCTTGACTTGCTTCCTGTACACGTGGAGCCTTCTAGGATGACGCTTCATCGGTTCGGGAACACTTCCTCGAGCTCTATTTGGTATGAGTTGGCTTATATTGAAGCTAAAGGGAGGGTAAACAAGGGTAACAAAGTTTGGCAAATTGCATTTGGAAGTGGTTTTAAGTGTAATAGTGCTGTTTGGGAGGCGATTCATGATGTGAAGCCTTCTCCTAATGGACCATGGGAAGATTGCATTGATAAGTATCCTGTGAAAATACTCGCATAG 1530 0.4255 MAVIGTTATTDVGTAGSRAKILVPDFHQSVKLKYVKLGYHYLISNLFSLSFIPLIIITLIHFFQTQNLNQLWLLHDHYNLIRMLTFTGFIVFAFTLCVHKRQRAVYLVDFSCFRPADHLKAPFHSFIQHSHLTGDFDDSSLDFQRKILLRSGLGDETFPEAMHYIPPRPSISAARCEAESVMFGALENLFVNTNLNPKEIGILVVNCSLFNPTPSLSSMIVNKYNLRSNIMSFNLGGMGCSAGVIAIDLARDLLRVQKDNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSADRTRAKYKLVHVVRTHCGADDKAFRCVYQEEDALGKTGVSLSKDLMRIAGLSLKTNITTLGPLVLPVTQQLRFFANLVFSKISKSDAKIYIPDFKLAFDHFCIHAGGRAVIDELERNLDLLPVHVEPSRMTLHRFGNTSSSSIWYELAYIEAKGRVNKGNKVWQIAFGSGFKCNSAVWEAIHDVKPSPNGPWEDCIDKYPVKILA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0205 509 Pfam FAE1/Type III polyketide synthase-like protein 99 385 IPR013601 GO:0006633|GO:0016020|GO:0016747
Psa6g0205 509 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 402 483 IPR013747 -
Psa6g0205 509 CDD CHS_like 89 482 - -
Psa6g0205 509 PANTHER 3-KETOACYL-COA SYNTHASE 4 17 508 - -
Psa6g0205 509 PIRSF Very_long_ch_3-ktacl-CoA_syn 25 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Psa6g0205 509 Gene3D - 133 485 IPR016039 GO:0016746
Psa6g0205 509 SUPERFAMILY Thiolase-like 91 308 IPR016039 GO:0016746
Psa6g0205 509 PANTHER 3-KETOACYL-COA SYNTHASE 17 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
Psa6g0205 509 SUPERFAMILY Thiolase-like 314 484 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0205 Psa-Chr6 6549278 6551230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0205 18 507 Miscellaneous Gene Families AT1G19440 72.819 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0205 K15397 - gmx:100797855 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0205 6 6549278 6551230 Psa6g0205 6 6549278 6551230 ECH