Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0178 ATGGAGTCCTTCTGTGTCAACTCTTTGTACGCTGTTTCTCCTCAATTGACTCTTTCACCGCGAACCAAACAGAAGAAGGCATGGCGAGTGCGAATTTCGAGTATGGCTGCCACAACTGGAAATTCTGTAAAAAACGCCGCCGTTTCGAAGCCGCTGCAGAGTAATTCCAAGTCCAATAACAGTGCTCTGGAGCAACTTGATATCGAGCGTGGCGTCTGCATCCCTTTCCGCAAGTACTCTCCTGAGATTGTGAGGAATAAGGTATTAGAATCAAGAGGAGCTATTTTGTCTCTAATTTCGCGGGGAGTGGAGATAGTCTTAAGTCTGGGCTTGTATTGGTCTGCGTTGGTGTATGATTTCCTAGTTGGAAGGGATGAAGAAGTTGTTCCATTTCGTGCTCGACAGCTTAGGAACCTCTTGTGTGACCTGGGCCCTTCCTTTATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCAGATATCATTAGAGAAGACTATATGAATGAACTTTGCATTCTTCAAGATGATGTCCCTTCATTTCCAAATCAAACTGCCTTCAATATCATAGAGGAAGAACTGGGTCAGCCCCTTGAAGCTGTTTTCAGCAGAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGGGCTACTTTACGTGCCACTGGCGAGGATGTTGCTATAAAGGTTCAAAGGCCCGGGATAGAGCCCATAATTTATCGAGATCTCTTCCTGTTTCGCACTTTAGCTTCATTCTTAAATGGCTTCAGTATACAGAAGCTGGGGTGTAATGCTGAGCTGATTGTTGATGAATTTGGTGAAAAGCTTTTGGAAGAGCTTGACTATACACTGGAAGCCCGCAATATTGAAGATTTTCTAGAAAATTTTAAAAATGACCCCACTGTCAAAATTCCTCTGGTTTACAAACAACTTTCTGGGCCACGTGTATTAGTGATGGAATGGATTGATGGTATTAGATGCACCAATCCACAGGCCATTAAAGAAGGTGGAATTGATCTAGATGGATTTCTAACAATTGGTGTGAGTGCTGCCCTTAGACAACTGTTGGAATTTGGATTATTTCATGGAGACCCTCACCCTGGAAATATTTTCGCCATGCGCGACGGACGGATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTTAGTGAGCAAAATAAACAGATTCTAACTGATGCTGTTGTACACGCCGTGAATGAGGACTATGCTGAGATGGCTAATGATTTCACCAGATTAGGCTTCCTGGCAGCAGGGACTGATGTCTCTCCAATAGTTCCTGCTTTAGAAGCAATTTGGCAGGACTCTTCTGGAAAAGGATTGGCAGATTTTAATTTTCGTAGTGTCACTGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATCCCTGAAAGGTTTTCACTCGTAATTCGTTCTTTATTGACTCAAGAGGGCATCTGTTTTACTCTGAAGCCTGACTTCAAATTTCTTGAGGTTGCCTATCCATATGTGGCTAAGCGATTACTAACAGATCCAAATCCAGCTCTACGCGAACGACTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAATGGAAGCGACTTGAAAACCTTATTGTTCTTGCAAAGGAAAACGTGGCCAAAATGAGCAGCAATCCAGCATTGCAAGTGAGAAACACGCAAACCCAGAGAAACTGGAAAGTTGCAAAAAAACTGGACCTTACAGACACAATCAAAGACGGAGCTCGCCTTTTCTTTGTTGACGAAGGAATCCGCCGGCAGCTTCTACTTGCTTTGACTGAGGACTCAAAGCTTCATATAGAAGAGCTTGTCGATGTGTATAGGTTGGTTGAAGATCAAATAGATATACCCTCAGTGGCTGTAGAAGTAGCTCGAGACTTCCCAACTGTTGTCAGGGATATCCTACTTTCATGGAGCGCGTCCGTCTTATCGGATAGATAG 1971 0.4343 MESFCVNSLYAVSPQLTLSPRTKQKKAWRVRISSMAATTGNSVKNAAVSKPLQSNSKSNNSALEQLDIERGVCIPFRKYSPEIVRNKVLESRGAILSLISRGVEIVLSLGLYWSALVYDFLVGRDEEVVPFRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPSFPNQTAFNIIEEELGQPLEAVFSRISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGFSIQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKNDPTVKIPLVYKQLSGPRVLVMEWIDGIRCTNPQAIKEGGIDLDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSEQNKQILTDAVVHAVNEDYAEMANDFTRLGFLAAGTDVSPIVPALEAIWQDSSGKGLADFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSSNPALQVRNTQTQRNWKVAKKLDLTDTIKDGARLFFVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVARDFPTVVRDILLSWSASVLSDR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0178 656 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 21 656 - -
Psa6g0178 656 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 21 656 - -
Psa6g0178 656 ProSiteProfiles Protein kinase domain profile. 202 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0178 656 CDD ABC1_ADCK3-like 172 418 - -
Psa6g0178 656 Gene3D Transferase(Phosphotransferase) domain 1 201 408 - -
Psa6g0178 656 SUPERFAMILY Protein kinase-like (PK-like) 173 390 IPR011009 -
Psa6g0178 656 Pfam ABC1 atypical kinase-like domain 172 416 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0178 Psa-Chr6 5523510 5535213 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0178 - - gmx:100790292 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0178 6 5523510 5535213 Psa6g0178 6 5523510 5535213 ECH