Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6954 ATGTCTCCATCTAGAATATTCAGTCTTGCAATCACTGCTTCTTTCATTTTCTCCCTCATTGTTCTACTTCCTAGATCAGGTGGAAGAGTGTTATGTGATGAGAGTGGTTTGGAGGAAAGGAAAGTGGTGATAGGGTCAAAGCCACCTGAATGTGTAAACAAGTGCATGAAGTGTAGGCCATGCATGGCTACTGTGGTTGTTAATGATCATGATCACCAAAAGAAGAAGGGGTTCAAGTTAGACTCTTCTCATGAAGAAAATGATAGCTATTATCTCCTTTCATGGAAATGCAGATGTGGTAATAAATTGTTTCAACCATGA 321 0.3956 MSPSRIFSLAITASFIFSLIVLLPRSGGRVLCDESGLEERKVVIGSKPPECVNKCMKCRPCMATVVVNDHDHQKKKGFKLDSSHEENDSYYLLSWKCRCGNKLFQP* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6954 106 Pfam Epidermal patterning factor proteins 43 106 - -
Psa5g6954 106 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 8 106 - -
Psa5g6954 106 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 8 106 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6954 Psa-Chr5 570464261 570465054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6954 - - gmx:102659819 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6954 5 570464261 570465054 Psa7g5870 7 485386087 485387615 PCT