Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6939 ATGGAAGTCATAACTGAAGGAGTAAACAACATCAACATTAATAACTCCGATTCTTACAAGAAGAATCGCATTCAAGTTTCTAACACCAAGAAACCCCTCTTCTTCTATGTTAATCTCGCCAAGAGATACATGCAACAGCATAACGAGGTGGAACTCTCAGCACTAGGAATGGCTATTGCTACTGTAGTAACTGTTGCTGAGATTTTGAAAAATAACGGACTTGCCGTCGAAAAGAAAATCATGACATCAACTGTTGATATAAAGGATGATTCTAGAGGTAGACCTGTCCAAAAGGCCAAGATCGAAATAGTACTTGGAAAGACGGAAAATTTTGATGAGCTGATGGCAGCTGCGGCCGCTGAAGATGGTGAAAATGGAGATGCTGAAGAACAGAATGCTTAA 402 0.4005 MEVITEGVNNININNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAAEDGENGDAEEQNA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6939 133 PANTHER - 1 127 - -
Psa5g6939 133 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 127 IPR014560 -
Psa5g6939 133 PIRSF UCP030333_Alba 1 133 IPR014560 -
Psa5g6939 133 Gene3D - 20 132 IPR036882 GO:0003676
Psa5g6939 133 SUPERFAMILY AlbA-like 21 116 IPR036882 GO:0003676
Psa5g6939 133 Pfam Alba 22 77 IPR002775 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6939 Psa-Chr5 569849630 569850541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6939 - - gmx:100527358 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6939 5 569849630 569850541 Psa5g6939 5 569849630 569850541 ECH
Psa5g6939 5 569849630 569850541 Psa7g5866 7 485242989 485244902 PCT