Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6876 ATGAGTGTGGTCGGTTTTGATTTCGGTAACGAGAGCTGCATTGTTGCTGTTGCAAGGCAGAGAGGGATTGATGTTGTCCTTAATGATGAGTCCAAGCGTGAGACTCCTGCGATTGTGTGTTTCGGTGATAAACAGCGGTTCATTGGGACAGCTGGGGCTGCTTCTACTATGATGAACCCTAAAAATTCTATCTCGCAGATGAAGAGGTTGATTGGTAAGAAATTTGCTGATCCAGAAGTGCAGAGTGATTTGAAGTCATTGCCTTTTGCTGTCACTGAAGGGCCTGATGGGTACCCGTTAATTCATGTGAGGTATCTTGGTGAAGCTAGAGCATATACAGCCACCCAAGTTTTTGCGATGATGCTGTCAAATCTTAAAGAGATTGCCCAGAAAAATCTGAATGCGGCTGTTGTTGATTGCTGCATTGGAATTCCAATTTATTTTACTGATCTCCAGAGAAGAGCTGTATTGGATGCAGCCACTATTGCAGGTCTGCACCCGCTTCACTTGATTCATGAAACAACAGCAACTGCTTTGGCTTATGGAATTTACAAGACCGATCTTCCTGAAAATGATCAGCTGAATGTTGCTTTTGTTGATGTTGGGCATGCTAGCATGCAAGTTTGTATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTATTGTCCCATTCATACGATAGGTCACTGGGTGGTAGGGATTTTGACGAGGCTTTGTTCCATCATTTTGCTGCAAAATTCAAGGAGGAGTACAAGATTGATGTTTACCAGAATGCCAGGGCTTCTCTGAGGCTGAGGACTGCATGTGAGAAGCTGAAGAAAGTTCTCAGCGCAAATCCTGAGGCACCTCTGAACATTGAATGCTTAATGGAAGAGAAGGATGTGAGGGGACATATCAAGCGTGACGACTTTGAGCAGCTATCTCTTCCAATATTGGAACGTGTGAAGGGGCCTTTGGAGAAGGCACTAGCAGAAGCTGGTCTTACAGTTGAGAATATCCACATGGTTGAGGTAGTTGGTTCTGGTTCTCGCGTACCAGCAATAAACAAAATATTGACAGAGTTCTTCAAAAAGGAACCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGCGCTGCATTGCAGTGTGCTATTCTCAGTCCAACTTTTAAAGTCCGAGAGTTCCAGGTCAATGAAAGCTTTCCCTTCTCAATTTCTCTCTCATGGAAAGGTTCTGGTTCAGATGCACAGGACAGTGCACCAGACAATAAACAAAGTACCCTTGTTTTTCCCAAGGGAAATTCCATTCCAAGTGTCAAGGTACTGACATTCTTCAGGACAGAAACCTTTTCTGTTGATGTACAATGTCATGATCAGAGTGATACACAAGGACCTACAAAGATCAGCACGTATACTATTGGCCCTTTCAAAACTGAAAATGGTGAAAAGGGAAAGATTAAAGTGAAAGTTCGTTTGAATCTTCATGGAATTGTAACTGTTGATTCGGCAACTCTCTTCGAAGAGGAAGAAATTGAAGTTCCAGTTACCAAAGAATCAGCAGAAGAAAATGCTAAGATGGAAACTGATGAAGCTTCGGCCGATGCTGCTGCACTACCTCCTAGCTCCAATGACAGTGATGTTAATATGCAAGATGCTAAGGCAGCTGCTGATACCAATGGAGCTGTAAATGGCGTGCCTGAGACAGGAGACAAGCCTGTGCAAATGGATACTGATGCCAAGGTTGAGGCTCCAAAGAAAAAAGTGAAGAAATCGAACATTCCTTTAGCAGTGGTAGTCTATGGGGCAATGTCAGCTGTGGATGTTCAGAAAGCCGTAGAAAAGGAGTTTGAAATGGCTTTGCAGGATCGAGTGATGGAGGATACAAAGGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAATAAGCTTAATGACAAATACCATGAGTTTGTCCAAGCTTCAGAAAGCGGTGAATTTCTTGCGAAACTTCAGGAGGTGGAGGATTGGCTATATGAGGATGGTGAAGATGAAACCAAAGGTGTATATGTTGCCAAGCTAGAAGAACTCAAAAAGCAAGGGGATCCAATCGAGGAGCGCTACAAAGAACACACAGACAGAGATGCAGTAATTGAGCAGCTTGTCTATTGTATCAATAGTTACAGAGAAGTTGCAATGTCTAACGATCCCAAATATGATCACATTGACATCAATGAGAAACAGAAGGTCTTGAATGAATGTGGAGAAGCTGAGAACTGGCTTAGAGAGAAGAAGCAACAACAGAGTTTGCTTCCAAAATATGCTACCCCCGTCCTATTGTCAGCTGATATAAGAAAAAAAGCTGAGGCTGTTGATAGGTCCTGCAAGCCGATTATGACAAAACCAAAACCGGCAAAACCAGCTTCTCCGGCCACTCCAGCTACTCCAGAAACACCAGCAACCCCACCTCCTCAGGACAGCGAGCAGCAGCAACAACCAGAACAGCAACCTCAGGAGGATGCTAATGTCCATTCTAATGGGAATGCAGAGGACAATGGTAATCAAGTCCCAGCAGCCTCTGGTGGTGAACCAATGGAGACTGATAAACCAGAGAACCCCGGCTCAGCCTAA 2598 0.4403 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQMKRLIGKKFADPEVQSDLKSLPFAVTEGPDGYPLIHVRYLGEARAYTATQVFAMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSHSYDRSLGGRDFDEALFHHFAAKFKEEYKIDVYQNARASLRLRTACEKLKKVLSANPEAPLNIECLMEEKDVRGHIKRDDFEQLSLPILERVKGPLEKALAEAGLTVENIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGAALQCAILSPTFKVREFQVNESFPFSISLSWKGSGSDAQDSAPDNKQSTLVFPKGNSIPSVKVLTFFRTETFSVDVQCHDQSDTQGPTKISTYTIGPFKTENGEKGKIKVKVRLNLHGIVTVDSATLFEEEEIEVPVTKESAEENAKMETDEASADAAALPPSSNDSDVNMQDAKAAADTNGAVNGVPETGDKPVQMDTDAKVEAPKKKVKKSNIPLAVVVYGAMSAVDVQKAVEKEFEMALQDRVMEDTKDKKNAVEAYVYDMRNKLNDKYHEFVQASESGEFLAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEHTDRDAVIEQLVYCINSYREVAMSNDPKYDHIDINEKQKVLNECGEAENWLREKKQQQSLLPKYATPVLLSADIRKKAEAVDRSCKPIMTKPKPAKPASPATPATPETPATPPPQDSEQQQQPEQQPQEDANVHSNGNAEDNGNQVPAASGGEPMETDKPENPGSA* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6876 865 Gene3D - 38 113 - -
Psa5g6876 865 Gene3D - 5 374 - -
Psa5g6876 865 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Psa5g6876 865 CDD HSPA4_like_NDB 2 381 - -
Psa5g6876 865 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 862 - -
Psa5g6876 865 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 525 IPR029047 -
Psa5g6876 865 MobiDBLite consensus disorder prediction 507 541 - -
Psa5g6876 865 Gene3D Actin; Chain A, domain 4 230 313 - -
Psa5g6876 865 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 600 697 IPR029048 -
Psa5g6876 865 Gene3D - 597 709 IPR029048 -
Psa5g6876 865 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Psa5g6876 865 PRINTS 70kDa heat shock protein signature 2 15 - -
Psa5g6876 865 PRINTS 70kDa heat shock protein signature 30 42 - -
Psa5g6876 865 PRINTS 70kDa heat shock protein signature 140 160 - -
Psa5g6876 865 PRINTS 70kDa heat shock protein signature 332 348 - -
Psa5g6876 865 PRINTS 70kDa heat shock protein signature 363 383 - -
Psa5g6876 865 PANTHER HSC70CB, ISOFORM G-RELATED 1 862 - -
Psa5g6876 865 Gene3D - 186 360 - -
Psa5g6876 865 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Psa5g6876 865 MobiDBLite consensus disorder prediction 813 844 - -
Psa5g6876 865 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Psa5g6876 865 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 709 797 IPR029048 -
Psa5g6876 865 MobiDBLite consensus disorder prediction 507 523 - -
Psa5g6876 865 MobiDBLite consensus disorder prediction 792 812 - -
Psa5g6876 865 MobiDBLite consensus disorder prediction 782 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6876 Psa-Chr5 566154335 566159733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6876 4 438 Calmodulin-binding Proteins AT1G16030 35.388 1.13e-86 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6876 K09489 - gmx:100778196 1357.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6876 5 566154335 566159733 Psa5g6876 5 566154335 566159733 ECH
Psa5g6876 5 566154335 566159733 Psa7g6046 7 490308973 490313571 PCT