Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6670 ATGGCGAATCTTGTTCCTGGTGTGCTTTTGAAGCTTTTACAACACATGAATACAGATGTGAAGGTTGGTGGTGAACACAGATCATCGCTTTTACAAGTTGTTAGCATTGTTCCAGCTCTTGCAGGTGGTGAACTTTTCCCAAATCAAGGTTTTTATCTTAAGGTTTCAGATTCATCTCATGCTACTTATGTTTCTTTACCTGATGAACATGATGATTTGATTTTGAGTGATAAGATTCAATTGGGTCAGTTTGTTTTTGTTGATCGTTTTGAAGCTTCTTCTCCTGTTCCTGTAATTAGGGGTGTTAAGCCTGTTCCTGGGAGACACCCTTGTGTTGGTACTCCTGAGGATATTGTTGCTACTCATTCACTTTCGTTTCTTGACAACAATGATAATGATACTAGGAAGAATAAGAATGATGTTGTCTCTTCTGAGAGTCCTAGGAATAGGAATGTGTTTGGTGTGAAGGAGAAAGAGAAGAAGGAGAGACTGAGGTTGAGTTTTGGTGGTGTTATTGTTAAGGAGGAAGGGTTAGAGAAGAAGGAGAGAGTGAGATTGAGTTTTGGTGGTGGGAGTGTTAAGGAGGAAGGGTTGGAGAAGAAAAGAGGGATTTTTGGAAGAGGTAGTAGTAAAAGTGAGTATTTGAAAACAAAACCAATGTTGAAGATTGATGTGAAGAAGGAATTGTTACCTCAATCGTCGTTAACTAGAGTGAGGTCGGCGAATTCGAAGTCGATTCCTTCTTCGCCTAGTAGTGTTTATTCATTGCCTAATTCTTTTGAGAAATTTTCTAATGGTGTTAAGCAGCAGAGAGCAAAGGTTGGTGGTAAGGGAGTGGAGAAGGTTGTGGGAGTGGTTGATGCGGGAAAAGTTGGGAAGAAAATCGGTTTGGGAAATCCAATTAGAAATTTGGTGCAAGGTTTTGATTTCGGGGCTAAGGCTCTAAGAAAGAGTTGGGAAGGAACTATGGAGATCAAGACTAAAGACTCTTCCAAAATCAAGGGCGCTGCTGCTAAGCCGGTAGTTCAAAGCTCCATTCCTAGGAGAAGCATGGCAACTGATAAGTTGCCGTCTAGAGAGGTTAAAGCCCCGATAAAGCCCTCTAAGGAAGAACATAAGGCTCAAGTGTCTATAAAGAAGGTTAGTGCTAATGGAGTTATAGAGGAACAAGAGAAATCAAGTAAGCCAAGGACTTCCTTTGTAAAGAAATCGGCAGAAGTTTCTAACAACGGATTACCTGGCAACATGGTCAAAGTTTCTCTAAGTAGTAAAAAAGTGAATGATTCAAGTGTCCAATGGGCGTCACTCCCGTCATCTATTTCAAAGCTTGGAAAGGACGTAATGAAGCACAGAGATTCTGCACAGCTGGCTGCAATTGAGGCTATGCAAGAAGCCGCCGCAGCCGAGAATTTGTTACAATGTCTGAGTATATATTCGGAGCTGACTAATTCTGCGAAGGAACATAACCCGCAGCCAGCAGTAGAGCAGTTTTTATCGCTTCATGCAAGCCTAAATAGTACCCGAACAATTGCAGAATCCTTATCTAAACCCATTCCAGATGGTTCGCCTCCGGATTATGAAAATAGCAAACTGGAAGAAGCACTAAAACAAAAATCAGATAGACAAAAACATGCGGCGTCTTGGGTCCACGCCGCCCTGGCCACCAACCTCTCATCTTTCGCTGTTTATTCAAAAGAAGCTTCAAGTAATAATTCTCAAATTCAAAAGACTGCAGTTGGAATTCAATCCGCGTTAGTCCTACACAATTCAAGCGAAAATTCATCGTCGAAAGTTCGCGTAAAACCTCGTCCAACAGTTCATTCCAAGCTTGTCTCACAAGGCATTCTTCCTCGCAAATCAACCGATTCAGCAAACGGACACAAGCAACCAGTCCAACCACCCCCAGAGTGGATCAAAGGAAATGGTCTCGACGAGGTCGTTGATTTGGCTGAAATGTTGCAGGTACAATCCCGAGACTGGTTTTTGGGATTCGTTGAAAGATTCTTGGACAGTGACGGCGACACTACCTTATCAGATAACGGCCAAATAGCAGGTATGCTCACTCAACTAAAGAGCGTAAACGATTGGTTAGACGAGATAGGATTGAGCAAAGACGAAGGCGAATCATGCCAGATATCAGCAGAGACAATCGACCGACTGAGAAAAAAGATATACGAGTATCTTCTCACGCACGTCGAATCCGCTGCAGCTGCACTTAGCGGCGGATCACAATCACAATCACAAGCATTGCCTCAGATCCAAACATCACAGATTAAAGCCAAAAGATGA 2289 0.4264 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRFEASSPVPVIRGVKPVPGRHPCVGTPEDIVATHSLSFLDNNDNDTRKNKNDVVSSESPRNRNVFGVKEKEKKERLRLSFGGVIVKEEGLEKKERVRLSFGGGSVKEEGLEKKRGIFGRGSSKSEYLKTKPMLKIDVKKELLPQSSLTRVRSANSKSIPSSPSSVYSLPNSFEKFSNGVKQQRAKVGGKGVEKVVGVVDAGKVGKKIGLGNPIRNLVQGFDFGAKALRKSWEGTMEIKTKDSSKIKGAAAKPVVQSSIPRRSMATDKLPSREVKAPIKPSKEEHKAQVSIKKVSANGVIEEQEKSSKPRTSFVKKSAEVSNNGLPGNMVKVSLSSKKVNDSSVQWASLPSSISKLGKDVMKHRDSAQLAAIEAMQEAAAAENLLQCLSIYSELTNSAKEHNPQPAVEQFLSLHASLNSTRTIAESLSKPIPDGSPPDYENSKLEEALKQKSDRQKHAASWVHAALATNLSSFAVYSKEASSNNSQIQKTAVGIQSALVLHNSSENSSSKVRVKPRPTVHSKLVSQGILPRKSTDSANGHKQPVQPPPEWIKGNGLDEVVDLAEMLQVQSRDWFLGFVERFLDSDGDTTLSDNGQIAGMLTQLKSVNDWLDEIGLSKDEGESCQISAETIDRLRKKIYEYLLTHVESAAAALSGGSQSQSQALPQIQTSQIKAKR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6670 762 PANTHER DUF936 FAMILY PROTEIN 1 761 - -
Psa5g6670 762 MobiDBLite consensus disorder prediction 590 611 - -
Psa5g6670 762 MobiDBLite consensus disorder prediction 336 358 - -
Psa5g6670 762 PANTHER EXPRESSED PROTEIN 1 761 IPR010341 -
Psa5g6670 762 Pfam Plant protein of unknown function (DUF936) 4 739 IPR010341 -
Psa5g6670 762 MobiDBLite consensus disorder prediction 740 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6670 Psa-Chr5 556544478 556548225 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6670 - - cam:101502274 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6670 5 556544478 556548225 Psa5g6670 5 556544478 556548225 ECH
Psa5g6670 5 556544478 556548225 Psa7g4790 7 415855274 415859890 PCT