Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6374 ATGGCTAAAGGAGCATCTCAATCCCAATCATCAACTTCAACAGCCTCCCGCCCCGGAGGCGGAGGAGTCGTCGCTCCCCGCGGCTCCGCTGCCGCAACCGCTGGCATGCGCCGTCGCCGTGTCACCTCCGGAAACAGCACCGCCAGTGTCGGAGGCGGATCCAGCGGAAGCAACAACATGCTGAGATTCTACACGGACGATGCTCCCGGGCTGAAGATATCGCCGACGGTGGTGCTAGTTATGAGTCTCTGCTTCATCGGTTTCGTCACCGCGCTTCATGTGTTCGGGAAGCTTTATCGGTACAAATCTGGCGGTGGTGTATGA 324 0.5926 MAKGASQSQSSTSTASRPGGGGVVAPRGSAAATAGMRRRRVTSGNSTASVGGGSSGSNNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYKSGGGV* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6374 107 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 105 - -
Psa5g6374 107 Pfam Sec61beta family 57 96 IPR016482 -
Psa5g6374 107 PANTHER SEC61 SUBUNIT BETA 1 105 IPR030671 GO:0005784|GO:0006886
Psa5g6374 107 MobiDBLite consensus disorder prediction 39 53 - -
Psa5g6374 107 MobiDBLite consensus disorder prediction 1 18 - -
Psa5g6374 107 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6374 Psa-Chr5 541629723 541631300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6374 K09481 - gmx:100814692 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6374 5 541629723 541631300 Psa7g5130 7 449456150 449457039 PCT