Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6363 ATGAAAAACCAGCTCCAAGATTGCAAAGAGTCGGTTCAGGCTAAACCTTTGGTGAATGAGACTCTGCGACAGCTCGAGGCAGCGAAAAGAACGGTAGAGTTCTTGAGAGCTGATGCTGCAAAAGCTGTGCATGGATACAACTCTTCTGCTTTAGAGTTAGACGAGTCTAGAACACGCGAGGTTTCACTCGACAGTAATTTGAAAATAGAAGCGGAAAGATTGGGAAAGGGAGATAGTACTAATCATATTGAAATCGAGTTTCGTTCTTTGAGATCTGAGGTTGAATTACTTAGGTCTGCGATTGAGATTGCCGAGATTAAATTTCAGGAAGAACAGATTCAGAACACAGTGAAGATTAGAAATGCTTACGAGTTTATCGAACGGATAAAATCGGAATCGAGTCAGAGGGAATCAGAACTGGAAAGACAGAAAAATGAAATTGAGGAGTTGAAGGAGAAATTGTTGGATAAGGAAAATGAGTTGCATGGTATTGTAGATGAGAATGGGAAATTGAACTCGAAGGAACGCGAACTTAAGGAGGAACTTAAGAGGTTAGACGAATGTGTTGCGGTAATGAAGGGTGAAATGATGGATAAAGAGACGACATTGCAAAGTATATCAGAAGAGAATGAAATTCTGAAGATGGAAATCAATAAGAGGTTCACATTCTCACATGTTGGTATGATGAGTGACGAAGTTGCCGCCGAAATAGGGGCGGCCAAGGCTGCAGAACGCGACGCGTTTGCAAAACTTAAGATAATGATTGAGGAGGCAGAGAGGAGCAATAACAAGGCGGAAAGAGTGACTGAGATGCTCGAAGCAGCACGAGCGGCGAATGCGGAAAAAGAAGCTGAATTGAAGAGAATCAAAGTGCAATGTGATCAGTGGAGGAAGGCTGCGGAGACAGCTGCTGCTATGTTTTCGGCAGGAAAAAATGGGAACATCGCGGAGAGGTCGATGTCTATGGATAACTGCTACAACAGCAGGGTGATGAAGAGTAATAAGTACTCAAACTTTTATGAAGAGATTGATGATTGGAGTGATTTACAAAGAAAGAAAAATGGGAATGTGTTGAAAAAGATTGGTGACTTGTGGAAAAAGCCTCAGAAAATCACTGGTTGA 1122 0.4207 MKNQLQDCKESVQAKPLVNETLRQLEAAKRTVEFLRADAAKAVHGYNSSALELDESRTREVSLDSNLKIEAERLGKGDSTNHIEIEFRSLRSEVELLRSAIEIAEIKFQEEQIQNTVKIRNAYEFIERIKSESSQRESELERQKNEIEELKEKLLDKENELHGIVDENGKLNSKERELKEELKRLDECVAVMKGEMMDKETTLQSISEENEILKMEINKRFTFSHVGMMSDEVAAEIGAAKAAERDAFAKLKIMIEEAERSNNKAERVTEMLEAARAANAEKEAELKRIKVQCDQWRKAAETAAAMFSAGKNGNIAERSMSMDNCYNSRVMKSNKYSNFYEEIDDWSDLQRKKNGNVLKKIGDLWKKPQKITG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6363 373 Coils Coil 87 107 - -
Psa5g6363 373 Coils Coil 196 216 - -
Psa5g6363 373 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 370 - -
Psa5g6363 373 Coils Coil 248 299 - -
Psa5g6363 373 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 370 IPR029688 -
Psa5g6363 373 Coils Coil 18 38 - -
Psa5g6363 373 Coils Coil 126 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6363 Psa-Chr5 540323853 540325948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6363 - - mtr:MTR_2g093260 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6363 5 540323853 540325948 Psa5g6363 5 540323853 540325948 ECH
Psa5g6363 5 540323853 540325948 Psa7g5089 7 446710658 446714390 PCT