Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6217 ATGTCAGGTGTTTCTCTTTGCACCCTTTATACTCCAACTCTCCTTCCTTTCTCTAACCCCCACAAAACCTCTGCTCCTATATTTTCCCAATCCGCAAAACGATGTCGTGTCATCACCTCCGTTGCAGAGGATCGTAAACCAATCCCGGTGGTGTCAAATGACAGAAAAGTCCTTCAGGATTCTCCGCCTTCCAACGACAACACAGAGGTTGTTAACGACACTGATATCATCACCGGACGTGCCATCAATGCTGCCATCGTTTTGGGATTTGGGGCTTTTGCTGTCACCAAATTGCTCACCATTGACCATGATTATTGGCATGGTTGGACACTTTATGAGATACTGAGGTATGTGCCTGAGCACAATTGGACTGCGTATGAACAATCTCTGAAAGCAAATCCAGTTTTAGCTAAAATGGCTATAAGTGGAGTTGTCTACTCAATTGGAGATTGGATTGCTCAGTGCTACGAAGGAAAGCCTATTTTCGAGTTTGATCGGGCGCGGCTATTCAGATCAGGTCTTGTTGGATTTACTCTCCATGGATCACTTTCTCACTATTACTACCAACTGTGTGAGACTCTTTTTCCTTTCCAAGAATGGTGGGTTGTCCCTGCTAAAGTTGCTTTTGATCAAACTGTGTGGTCGGCTATTTGGAACAGCATCTACTTTGTGGTTTTGGGCTTGTTGCGTTTCGACTCTTTGACTAACATTTATGGTGAACTCAAGGCAACATTTGTGCCCATGCTTACCGCAGGTTGGAAGCTTTGGCCTTTTGCCCATTTGATTACTTATGGTGTTATTCCTGTGGAACAAAGGCTTCTTTGGGTAGATTGCATCGAGCTCATCTGGGTCACTATACTTTCAACATATTCAAATGAGAAATCAGAGTCCCGAAAATTTGAGGAAGTATCTGAAACAAGCTCATCTACTTCTAGCCAGAATTCTAAGGAATTAAACGAGTAA 963 0.4341 MSGVSLCTLYTPTLLPFSNPHKTSAPIFSQSAKRCRVITSVAEDRKPIPVVSNDRKVLQDSPPSNDNTEVVNDTDIITGRAINAAIVLGFGAFAVTKLLTIDHDYWHGWTLYEILRYVPEHNWTAYEQSLKANPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRARLFRSGLVGFTLHGSLSHYYYQLCETLFPFQEWWVVPAKVAFDQTVWSAIWNSIYFVVLGLLRFDSLTNIYGELKATFVPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCIELIWVTILSTYSNEKSESRKFEEVSETSSSTSSQNSKELNE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6217 320 MobiDBLite consensus disorder prediction 293 320 - -
Psa5g6217 320 Pfam Mpv17 / PMP22 family 227 288 IPR007248 GO:0016021
Psa5g6217 320 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 26 316 IPR007248 GO:0016021
Psa5g6217 320 MobiDBLite consensus disorder prediction 304 320 - -
Psa5g6217 320 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 26 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6217 Psa-Chr5 530582650 530585819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6217 126 296 Miscellaneous Gene Families AT2G14860 27.485 6.09e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6217 K13348 - gmx:100789384 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6217 5 530582650 530585819 Psa5g6217 5 530582650 530585819 ECH