Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6157 ATGTCTTCCACCACTCTATCTCCCACAACCCCTTCTCAGCTATGTTCTGGAAAGAGTGGGATTTCATGTCCCTCAATAGCTCTTCTTGTGAAACCAACAAGGACGCAGATGACTGGGAGGGGTAATAAGGGAATGAAAATTACTTGCCAAGCTACCAGCATTCCTGCTGATCGTGTACCTGATATGAGTAAGAGGAAGACCTTGAATTTGCTTCTTCTTGGTGCTCTTTCACTTCCTACTGCTGGAATGCTTGTTCCATATGGTTCCTTCCTTGTACCTCCAGGCTCAGGTTCTTCAACTGGTGGTACCGTTGCCAAGGATGCCGTTGGCAATGATGTAGTTGCAACGGAATGGCTCAAGACTCATGCACCTGGCGACCGTACTCTTACACAAGGATTAAAGGGTGATCCTACCTACCTTGTGGTAGAGAAAGACAGAACACTTGCAACATTTGCGATTAACGCCGTATGCACTCATCTCGGGTGTGTCGTGCCGTTTAATCAAGCTGAGAACAAGTTCATCTGTCCCTGCCATGGATCTCAGTACAATGACCAAGGAAGAGTTGTGAGAGGACCTGCACCTTTGTCTCTAGCATTGGCACATTGTGATGTTGGTGTGGAGGATGGGAAGGTTGTGTTTGTTCCTTGGGTTGAAACAGATTTCAGAACAGGTGATGCTCCATGGTGGTCTTAG 693 0.4719 MSSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPDMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKTHAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6157 230 CDD Rieske_cytochrome_b6f 103 230 - -
Psa5g6157 230 Gene3D - 94 230 IPR036922 GO:0051537
Psa5g6157 230 SUPERFAMILY ISP domain 57 229 IPR036922 GO:0051537
Psa5g6157 230 PRINTS Rieske 2Fe-2S subunit signature 152 163 IPR005805 GO:0016020|GO:0051537
Psa5g6157 230 PRINTS Rieske 2Fe-2S subunit signature 173 185 IPR005805 GO:0016020|GO:0051537
Psa5g6157 230 PRINTS Rieske 2Fe-2S subunit signature 185 197 IPR005805 GO:0016020|GO:0051537
Psa5g6157 230 Pfam Rieske [2Fe-2S] domain 134 197 IPR017941 GO:0051537
Psa5g6157 230 Gene3D Single helix bin 49 93 - -
Psa5g6157 230 PANTHER CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT 1 227 - -
Psa5g6157 230 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 115 213 IPR017941 GO:0051537
Psa5g6157 230 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 227 IPR014349 GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6157 K02636 - gmx:100127419 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6157 5 526972497 526974605 Psa5g6157 5 526972497 526974605 ECH