Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6136 ATGTTGAGCCTATATGAGGCATCATATTTAGGGACAGAAGATGAAGAAATATTAAAGAAAGCATTAGAATTTTCAAGGACTCGTCTACATGAGTTCATCTCACACACGAGTCCTGAAATAGGTTATAGGCACATTGTTAGATCCTTAACACTTCCAAAGCATCTAAGAATGGCAAGGTTAGAAGCTAGAAACTACATGGATGAATATAGACATGCAAGTAACCAAATACCAGCTCTTTTGGAATTGGCAAAGTTAGACAATGACATGATTCAATCACTACATCAAACAGAGTTAGCAGAAATATGCAGGTGGTGGAAAGAGTTGGGACTTATTGAAAAACTAAGTTTTGCGAGAGATAGACCAACAGAGTGCTTCTTATGGACAGTGGGAATTTTTCCAGAACCATGTTATACAAATTGTCGTATCGAACTTACAAAAACCATATGCATTTTGGATGTCATTGATGACATCTTTGACAATTATGGCACATTAGATCAACTTGTTCTTTTCACACATGCAATCAAAAGGTGGGACCTTGATGCAATGGAGCAACTTCCTGAGTATATGAAGATATGCTATATGGCATTATATAACACCACAAATGAAATTTCATATAGTATTCAAAAAGAGCATGGGATAACTGTTGTTTCTTACTTAAAAAGAACATGGATGGACATGTTTGATGCATATTTGGAAGAAGCGAAATGGTTCAATAGTGGACATGTGCCAAGTTTTAGGACTTATTTGGATAATGGAGCAATTTCTGTTGGATCATGTATGGCATTGGTGCATGCTACTTTCCTCATTGGTGATGGTTTATCAAAGGAAACTATTTCCATGATGAAACCATATCCTAGACTCTTCACTTGCTCCGGAGAAATTCTTCGATTATGGGATGACTTAGGAACTTCAACGGAGGAACAAGAGAGAGGGGATAATGCTAGCAGCATACAATGCTTCATGGGAGAGAATAATATTAGAGATGAAAATGAAGGAAGGAAACACATAAGGTTGGTAATAAGGAACTTGTGGCGAGAACTCAATGGCCTTGCCATGAACAAAACTGTGCCCTTATCTGTTGTTAAAGCTTCTCTTAACATGGCTAGAACTGCTCAAGTTATTTATCAACATGGAGATGATAAAAGCACTTTTACTGTTGATGATTATGTGCAAACATTGATCTTCTCATCATTACCTAGTAATCATTAA 1209 0.3672 MLSLYEASYLGTEDEEILKKALEFSRTRLHEFISHTSPEIGYRHIVRSLTLPKHLRMARLEARNYMDEYRHASNQIPALLELAKLDNDMIQSLHQTELAEICRWWKELGLIEKLSFARDRPTECFLWTVGIFPEPCYTNCRIELTKTICILDVIDDIFDNYGTLDQLVLFTHAIKRWDLDAMEQLPEYMKICYMALYNTTNEISYSIQKEHGITVVSYLKRTWMDMFDAYLEEAKWFNSGHVPSFRTYLDNGAISVGSCMALVHATFLIGDGLSKETISMMKPYPRLFTCSGEILRLWDDLGTSTEEQERGDNASSIQCFMGENNIRDENEGRKHIRLVIRNLWRELNGLAMNKTVPLSVVKASLNMARTAQVIYQHGDDKSTFTVDDYVQTLIFSSLPSNH* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6136 402 Coils Coil 55 75 - -
Psa5g6136 402 SUPERFAMILY Terpenoid synthases 77 383 IPR008949 -
Psa5g6136 402 Gene3D - 1 75 IPR036965 GO:0010333|GO:0016829
Psa5g6136 402 SFLD Isoprenoid Synthase Type I 78 396 - -
Psa5g6136 402 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 1 71 IPR008930 -
Psa5g6136 402 Pfam Terpene synthase family, metal binding domain 80 346 IPR005630 GO:0000287|GO:0010333|GO:0016829
Psa5g6136 402 SFLD Terpene Cyclase Like 1 C Terminal Domain 78 396 IPR034741 -
Psa5g6136 402 CDD Terpene_cyclase_plant_C1 1 395 IPR044814 GO:0010333|GO:0016102
Psa5g6136 402 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 1 397 - -
Psa5g6136 402 Gene3D Farnesyl Diphosphate Synthase 76 383 IPR008949 -
Psa5g6136 402 PANTHER OS04G0344100 PROTEIN-RELATED 1 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6136 Psa-Chr5 525681588 525684172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6136 - - gmx:100807904 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6136 5 525681588 525684172 Psa5g6136 5 525681588 525684172 ECH