Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5800 ATGATTACTGCAAGCAGAATCAAATCCGTCGATTTTTACAGAAAAATCCCTAGAGATTTAACTGAGGCATCATTATCAGGAGCAGGGTTATCAATAGTAGCAGCTCTCACCATGGTGTTTTTATTCGGAATGGAACTTAGTGAATATTTATCTGTCAGCACCTCTACATCCGTGATCATTGACAAGAGTTCTGATGGGGACTTTTTACGTATTGATTTCAATTTCAGTTTTCCTGCACTTTCATGTGAGTTTGCATCGGTCGATGTGAGCGATGTGCTGGGAACAAGCAGGCTGAATCTAACAAAAACAGTTCGCAAGTTTTCTATTGATTCAACTTTAAGACCCACTGGGTTTGAATTTCATTCTAGCCCAGCTACTAATGTCATTAAGCATGATGATAAAGTGGATGAAGAATCTCCTGAAGGTGCTTTTGTATTCACGACAGACAATTTCGATAAATATTCTCATCAATTTCCAGTCACAGCTGTAAACTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCCTGAAACCTTCATGGGAGAAGGCAGCTAAAATATTAAGAGAGAGATATGATCCGGAAATGGATGGTCGAATACTTATGGGGAAGGTGGATTGCACTCAAGATTCAAGCTTGTGCCGGAGGCATCACATACAAGGGTATCCATCCATTCGTATCTTCCGTAAAGGAAGTGATGTCAGAAGTGACCATGGACATCATGAGCATGAGTCATATTATGGAGACCGTGATACAGATACCCTTGTTAAGACAATGGAGAATGTAGTGGCGGCTCTCCCTTCTAAGAAGCTAGCTTTGGATGATAAGTTAAATGTTACAGAGAATGCAAAAAGGCCAGCACCATCAGCTGGGGGATGTAGAATTGAAGGATATGTACGTGTCAAGAAGGTTCCAGGAAACTTGTTCGTCTCAGCAAGATCTGATAGCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATACACCATTTATCTTTTGGAAGGAAATTGTCACCTAGGGTTATGAATGATGTCAAGCGCTTGATACCTTATGTTGGTAACAGCCATGACAGACTGAATGGTCTGTCATTCATCAATACAAATGATTTAGGAGCAAATGTCACTATAGAGCATTACCTTCAGATAGTTAAAACAGAAGTCATTACTAAAAAAGACTATCAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAGCGTGGCACACAGTTTACACATTCCTGTTGCGAGGTTCCATCTTGAACTTTCCCCCATGCAGGTCTTGATAACTGAACATCAGAAGTCTTTTTCACATTTTATTACGAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTGCGGAATCAATTTTTCACAACACTGTTAGGATAATGAGAAAAGTTGAGCTTGGAAAGAATTTTTGA 1437 0.4015 MITASRIKSVDFYRKIPRDLTEASLSGAGLSIVAALTMVFLFGMELSEYLSVSTSTSVIIDKSSDGDFLRIDFNFSFPALSCEFASVDVSDVLGTSRLNLTKTVRKFSIDSTLRPTGFEFHSSPATNVIKHDDKVDEESPEGAFVFTTDNFDKYSHQFPVTAVNFYAPWCYWSQRLKPSWEKAAKILRERYDPEMDGRILMGKVDCTQDSSLCRRHHIQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTDTLVKTMENVVAALPSKKLALDDKLNVTENAKRPAPSAGGCRIEGYVRVKKVPGNLFVSARSDSHSFDASQMNMSHVIHHLSFGRKLSPRVMNDVKRLIPYVGNSHDRLNGLSFINTNDLGANVTIEHYLQIVKTEVITKKDYQLVEEYEYTAHSSVAHSLHIPVARFHLELSPMQVLITEHQKSFSHFITNVCAIIGGVFTVAGIAESIFHNTVRIMRKVELGKNF* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5800 478 Gene3D Glutaredoxin 126 285 - -
Psa5g5800 478 ProSiteProfiles Thioredoxin domain profile. 135 263 IPR013766 -
Psa5g5800 478 CDD PDI_a_family 145 258 - -
Psa5g5800 478 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 478 - -
Psa5g5800 478 Pfam Thioredoxin 145 243 IPR013766 -
Psa5g5800 478 Pfam Endoplasmic reticulum vesicle transporter 286 457 IPR012936 -
Psa5g5800 478 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 478 IPR045888 -
Psa5g5800 478 SUPERFAMILY Thioredoxin-like 143 261 IPR036249 -
Psa5g5800 478 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 96 IPR039542 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5800 Psa-Chr5 502783767 502791886 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5800 - - gmx:100809522 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5800 5 502783767 502791886 Psa5g5800 5 502783767 502791886 ECH