Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5790 ATGGAGTCGATACTGGGTCGGGCTCTCGAATACACTCTCAAATATTGGCTCAAATCCTTCACCAGAGATCAGTTCAAATTGCAAGGCCACACCGTTCACCTCTCAAATTTAGATATCGACGGTGATGCCTTGCATTCCAGTGTTGGATTACCGGCGGCGTTGAATGTTGCATCCGCTAAAGTTGGCAAACTTGAGATAACGCTTCCTTCGGTGAGTTATGTGCAAACAGAACCGATCATTGTGCAGATTGATAGACTCGATCTTGTTCTTGAGGAGAATTCTGATTTTGATGCATCTTCGAATCCAAACAGTTCCACCTCTTCGTCTGCGCCTGCCAAGGGTAGCGGTTATGGTTTTGCTGACAAGATTGCAGATGGCATGACTATAAACATTCATACAGTTAATCTATTACTTGAAACTCGCGGTAGTTCTCGTCGTCAAGGGGGAGCAACATGGGCACCACCTATGGCATCTATGACCATACGCAACCTTATGCTGTATACTACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCGCGGGAGTTCTCCAGTAACAAAAAGCACATATATGTCTTCAAAAAATTGGAATGGCAATCTTTGTCTATTGATCTTTTGCCGCATCCAGATATGTTCACAGATGTTGAAGAGGGGTCAAACCTGAGGGATGATGATGGTGCAAAAAGAGTATTCTTTGGAGGAGAGCGTTTTATAGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACTGAATTGAACAGTCCTCTTGGACTTGAGGTTCAACTGCACATCAATGAAGCTGTTTGCCCTGCGTTAAGTGAACCAGGACTTCGTGCACTTCTTCGCTTCATGACTGGAGTATATGTCTGTCTAAACAGGGGTGATGTTGATTTAAAGGCTCAGCAGCGGTCCACTGAAGCAGCCGGGTGTTCTCTTGTATCAATTGTCGTAGATCATATATTTCTTTGCATTAAAGATGCTGAATTCCAGCTTGAATTTTTGATGCAGTCCCTCTTTTTCTCTAGGGCCAGTCTTTCTGAAGTAGAGAGCGACAAGAACTTGACCAAGATCACGATTGGTGGATTATTTTTGAGGGACACCTTTTCTTCCCCTCCATGTACATTAGTGCAACCATCAATGCAAGCTGTCACCGGAGATGCTTTTCATGTGCCAGAATTTGCCAAAAGCTTTTGCCCTCCGATATATCCTCTAGGAGAACAACAATGGCAGTTGACCGAGGGTAGCCCTCTAATATGCCTCCATGCTCTCCAGATCATACCTTCTCCACTTCCACCATCCTTTGCTTCTCAAACTGTTATTGACTGTCAGCCACTAATGATTCATCTCCAAGAAGAATCATGCCTGAGGATTTCCTCTTTTCTAGCTGATGGTATTGTTCTCAGTTCTGGTGACATTTTACCAGACTTCTCAGTGAAATCTTTTATTTTTACTCTCAAGGGACTGGATCTTACCGTTCCTTTTGACAAGACCAAATTGGATATTTCTCGAAGTGACATGGACGATACAATCCATAACTCCTTTACGGGAGCAAGGCTTCATATTGAAAGCCTCTTATTTTTAGATTCACCTTCACTGAAACTAAGAATGCTGAACCTTGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAAGGTCAACCAATAGATACTACCCAGAAGAAGTGGACTGCCAGAGCATCCCAGCTTACTTTGTCTCTGGAAGCATGCATAGGTACAACTGGACACCAGACCTCAGGATTGTGGAGATGTGTTGATCTGACAGAAGCTTGCATTGAAGTAGCCATGGCAACAGTTGATGGAAGCCCGTTGTTGAAAATTCCTCCCCCAGGGGGTATTGTTAGGGTTGGAGTGGCTTGCGAACAATATTTGTCCAACACTTCTGTTGAGCAATTATTTTTCGTCCTAGATCTCTATGGTTATTTCGGAAAAGTTAGTGAAATGATGGCAATGGCTGGAAAAGGGAAACAACTGGAGGACATTGGGAACAAATCTTTTAGTGGAAAGCTTATGGACAAGGTTCCTAGCGACACTGCTGTGAGTTTAGCAGTGAAAAACCTCCAACTTCGATTCCTGGAGTCTTCATCAATGAATGTTGAGGGACTGCCATTAGTGCAGTTTGTTGGAGATGATCTGTTTACCAGTGCTACTCATAGAACCCTTGGTGGGGCTATTGTTGTTTCATCTTCTCTACGCTGGGAGAGTATTGAGATAAGTTGTGTGGATGCTGATGGGAAATTGGCATGTGAAAGTGTCTCTTCGTTGAGTTCTAGCATAAATGCTCCTTCACTGAGTGATAATAGATATCCTCAACTAAGACCTGTATTCTGGGTGCATAAGAATGAAGGACATCTATTGAATGCAAATGCTCAATCTTTCCCTTTTTTGGACATAAGCACAGTTCATGTCATACCATTACATGAACAAGACTTGGAGTCTCATAGTTTGAATGTCTCAGCTTTTGTATCTGGTGTTCGTCTTGGTGGGGGGATGAACTATACTGAAGCCCTCCTGCATAGATTTGGAATACTTGAGCCTGACGGAGCTCCTGGAAAGGGTCTTTGTAAAGGGTTGGAAAACTTACAAAAGGGACCTTTATCAAAACTTTTTAAGTCAACTCCTCTGATTGATGATACAGAAGATGTTGAGAGCATAGGGGAGGGGAAAGAAACAGGTTTTCCCCACTTGAAGAAGCCAGATGATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGGGCAGAGGATATGGCTGAAAAGTGGTGGTTCTCCAGTCACGAAGACGAAGGAAGAGAAGATAGGTGTTGGCACACATCTTTCCATAGCTTACAAGTAAATGCAAAAGGTAGCCCGAATAATGTTTCTGGTGGGAAAGGTCAAATACAAAAATTACGGCATCATCCAGTAGAAATGGTTACGGTTGGAGTTCAAGGGCTGCAAATCCTGAAGCCTCATATCCAACAAAACATTCCTTCATCAGCGGTAATTGGAAACGGGGTTAAGGAACTTACTGACATAGTTGGAGGGGTTGGTCTTGAAGTTCGCTTAGTATTATGTGAGGAGAATGTTGACGATGAAACCACTAACTGGGAAGTGGAAAATCTAAAATTCTCTGTTAGACAGCCGGTTGAGGCAGTTGTAACAAAGGATGAGCTTCAGCACCTTACTTTTTTGTGCAAATCTGAAATTGATTCAATTGGCCGAATAACTGCTGGAATTATAAGGTTGCTTAAGTTAGAAGGCTCTGTTGGTCAGTCTGTAATTGATCAACTAGGGAACCTAGGAAGCGAAGGCATTGACAAATTTTTCTCTGGTGAAAAGGTAAGTAGAGACGGTAGCATTGGTAGTAGAGGACGTTCTCCATTACCAAGCCTGATATATGAAGAACCAAACAAAACTCCGGAACAGACATTAGCTTTGCTTGAGGAAGCGGTTATGGATTCACAGACTAAAATCAATGACTTAATCAGTGACATTGGTACTTCTGAGTCTTCTTCCTTTCAACACCTTACCATCGTCAAACTGAGTCAAAAAATCGAGACTATGCAAGGTTTGTTACTGCAATTGCGGAATCAACTTTAA 3618 0.4256 MESILGRALEYTLKYWLKSFTRDQFKLQGHTVHLSNLDIDGDALHSSVGLPAALNVASAKVGKLEITLPSVSYVQTEPIIVQIDRLDLVLEENSDFDASSNPNSSTSSSAPAKGSGYGFADKIADGMTINIHTVNLLLETRGSSRRQGGATWAPPMASMTIRNLMLYTTNENWQVVNLKEAREFSSNKKHIYVFKKLEWQSLSIDLLPHPDMFTDVEEGSNLRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDLKAQQRSTEAAGCSLVSIVVDHIFLCIKDAEFQLEFLMQSLFFSRASLSEVESDKNLTKITIGGLFLRDTFSSPPCTLVQPSMQAVTGDAFHVPEFAKSFCPPIYPLGEQQWQLTEGSPLICLHALQIIPSPLPPSFASQTVIDCQPLMIHLQEESCLRISSFLADGIVLSSGDILPDFSVKSFIFTLKGLDLTVPFDKTKLDISRSDMDDTIHNSFTGARLHIESLLFLDSPSLKLRMLNLEKDPACFCLWEGQPIDTTQKKWTARASQLTLSLEACIGTTGHQTSGLWRCVDLTEACIEVAMATVDGSPLLKIPPPGGIVRVGVACEQYLSNTSVEQLFFVLDLYGYFGKVSEMMAMAGKGKQLEDIGNKSFSGKLMDKVPSDTAVSLAVKNLQLRFLESSSMNVEGLPLVQFVGDDLFTSATHRTLGGAIVVSSSLRWESIEISCVDADGKLACESVSSLSSSINAPSLSDNRYPQLRPVFWVHKNEGHLLNANAQSFPFLDISTVHVIPLHEQDLESHSLNVSAFVSGVRLGGGMNYTEALLHRFGILEPDGAPGKGLCKGLENLQKGPLSKLFKSTPLIDDTEDVESIGEGKETGFPHLKKPDDVDVTIELRDWLFALEGAEDMAEKWWFSSHEDEGREDRCWHTSFHSLQVNAKGSPNNVSGGKGQIQKLRHHPVEMVTVGVQGLQILKPHIQQNIPSSAVIGNGVKELTDIVGGVGLEVRLVLCEENVDDETTNWEVENLKFSVRQPVEAVVTKDELQHLTFLCKSEIDSIGRITAGIIRLLKLEGSVGQSVIDQLGNLGSEGIDKFFSGEKVSRDGSIGSRGRSPLPSLIYEEPNKTPEQTLALLEEAVMDSQTKINDLISDIGTSESSSFQHLTIVKLSQKIETMQGLLLQLRNQL* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5790 1205 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1204 - -
Psa5g5790 1205 Coils Coil 1184 1204 - -
Psa5g5790 1205 PANTHER UNCHARACTERIZED 1 1204 IPR026728 -
Psa5g5790 1205 Pfam N-terminal region of Chorein or VPS13 1 101 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5790 Psa-Chr5 502539139 502555034 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5790 - - gmx:100811661 1949.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5790 5 502539139 502555034 Psa5g5790 5 502539139 502555034 ECH