Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5745 ATGGGGATGAGGAATGATGGGCAGAAACAACAGGTTCTTCACCAGGGGGGTGTTGGTGTTGGTGGCAGAACCAATGGTTTTATTCCTAGCTCGTTTCGCGCTCTCTCGAGTTACCTGAGGATTGTTTCCTCGGGTGCTTCTACCGTTGCACGGTCTGCTGCGTCTGTTGCTTCGTCGATTGTGGACAGGGATGATGTTGCTGATCATGATCAGGTGATCTGGGCCGGGTTTGATCAGTTGGAGGGTGAGGGTGATATTGTTCAACAAGTGCTTCTTCTAGGCTATCGGTCTGGGTTTCAGGTTTGGCATGTTGATGAATCAAACAATGTCCGGGACCTTGTTTCCAAACACGGCGGTCCTGTTTCTTTTATGCAAATGGTTCCAAATCCAATTGCATCGAAAAAATCAGAAGACAAGTTTGCAAGCAGCCGCCCGTTGTTGGTCGTTTGTGCTGACGGGCTCTTTGCTGGCGGGAGCAATGTTAAGGATGGGTTGACTGGTCCTAACGGAACCACATCAAACTCCCATGACCAAATGAATGGCAACTATATGCCAACTACTGTTCAGTTTTATTCAATGAAATCCCACTCATATGTTCATGTAATGAAGTTCAGATCTGTTGTTTATTCTGTACGGTGCAGTTCTCGAATAGTTGCCGTTTCTCAATCCACTCAGATACATTGTTTTAATGCTACAACTTTAGAAAGGGAATATACTTTACTTACCAATCCAATAGTGATGAGTTCTCCTGGATCTGGAGGCATAGGCTATGGACCACTTGCGGTGGGTCCAAGATGGCTGGCTTATAGTGGAAGCCCAGTTGCGGTATCCACTTCCAGCCATGTCAGCCCGCAGCATTTAACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCAAATGGGGGGAGCTTGATTGCACACTATGCCAAAGAGTCAAGCAAGCATCTTGCTACCGGGATTGTGACCCTTGGAGATATGGGATATAAGAAACTTTCCAGATACTGTTCTGAAAACAATGGTTCACTACAATCGGCGAATTCTGGATCAAAGGTCAATGGAAGCATTAATGGCCATTCGGCAGATTTAGATAACATTGGAATGGTCATTGTTAAAGATATTGTCTCTAAAAATGTTGTTGCCCAATTTCGAGCTCATAAAAGTCCGATTTCAGCTTTATGTTTTGATCCTAGTGGCACCATATTAGTGACCACTTCTGTTCAGGGTCATAACATAAACGTTTTCAAGATTATGCCTGTGCGTGAGAATTCTTCAGCATCTGATGCCGGTCCTTCTTACGTTCATTTATACAGGCTGCAACGTGGTTTTACAAATGCGGTTATACAAGATATCAGTTTCAGTGACGACAGCAAGTGGATTATGATTAGTTCCTCGAGGGGCACTAGCCATCTATTTGCCATAAATCCTCAAGGAGGATACGTAAATATTCAGTCTAATGATGATAGTCTTGCCACAAAAAATAGTGGATTAAGCACTACGACTAATCAAGTAGTTCGCCGGTCTCCTATGTCAGCCGTTCAAATGCCTAAACAGCAGAGCCTGTACGTGGGTGGCCCTCCGATCACACTCTCCGTAGTAAGCAGAATTAGGAATGGGACTAATGGTTGGAGAGGCACGGTAAGTGGCGCCGCTGCAGCTGCAACTGGTAGGAAGAGTTCGCTTTCTGGGGCTATTGCTTCGTCTTTTCGTATTTGTAAAGGAAGTAGAGCCATGTACGGGGATGTGAACAATTCCAAGGCAAATTATCACTTATTGGTCTTTTCACCTACTGGATCGATGATACAGTATGCTCTTCGGACAATAACTAGCCAAGATTCAGCTGTTGTTTCTGGATTATCTCCTGTTTATGAATCCACTCCACAGGCCGATGCAAGATTAGTGGTTGAGGCAATGCATAAATGGAATATATATCATAGTCGGAGAGAGCGAGAAGACAATGTTGACATATATGGCGAAAATGGAATTTCCGACAGCAGCAAAATATATCCAGAGGAAGTAGAGGAGAACATCATTAACCCTAAAATTAAAAATGGTGTCATAAAAGGGAATCCCTATGTCAAAGAAGAGCATCATTTGTATATTTCAGAAGCAGAACTTCAAATGCATCCAGTTCAGATTCCGTTATGGGCGAAGCAAGAGATATATTTTAATTCAATGCTGAAAGAGTCCACCATAATGGATGAAGAAGCTGCTTCAGGAGGAGAGCTTGAGATCGAAAGGATTCCAACTTGCATGATTGAAGCTAGACCAAAAGACTTGGTTCCAATTTTCAACTATATGCAGACCCCAAAATTACAACAAACAAGGGCTCCTTCTATGGATAGCAAGATAAATGAACAAGTGTTGCATCGCGGTTCTGAGGTTTCTGGAAACGGTAGAATTTCACCTAGGCATATTTCAGAATCTCTCGAGCGCACGACTAATTATGGCGGTGAAATGACCAGTCATAAAAGTCAAATAGAAGGAACTGAGTGGAATAATCACGTGATGCCGGTAGAAACTAATGGCTTTGTAAATAACAATGACACCCTTAAACCAAATACTCAGCATGAGATTGTAAATAACAGGAGAGAGCACTTAAACACGGGGGCTCATCTCATGCGTGTAAATAGCAGCAACTCAAGCCCTGAAAATGAGGAACATCTTGAAGAAAATGAAGATGAATTTGATTGA 2688 0.4308 MGMRNDGQKQQVLHQGGVGVGGRTNGFIPSSFRALSSYLRIVSSGASTVARSAASVASSIVDRDDVADHDQVIWAGFDQLEGEGDIVQQVLLLGYRSGFQVWHVDESNNVRDLVSKHGGPVSFMQMVPNPIASKKSEDKFASSRPLLVVCADGLFAGGSNVKDGLTGPNGTTSNSHDQMNGNYMPTTVQFYSMKSHSYVHVMKFRSVVYSVRCSSRIVAVSQSTQIHCFNATTLEREYTLLTNPIVMSSPGSGGIGYGPLAVGPRWLAYSGSPVAVSTSSHVSPQHLTPSASFPGFSSNGGSLIAHYAKESSKHLATGIVTLGDMGYKKLSRYCSENNGSLQSANSGSKVNGSINGHSADLDNIGMVIVKDIVSKNVVAQFRAHKSPISALCFDPSGTILVTTSVQGHNINVFKIMPVRENSSASDAGPSYVHLYRLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGYVNIQSNDDSLATKNSGLSTTTNQVVRRSPMSAVQMPKQQSLYVGGPPITLSVVSRIRNGTNGWRGTVSGAAAAATGRKSSLSGAIASSFRICKGSRAMYGDVNNSKANYHLLVFSPTGSMIQYALRTITSQDSAVVSGLSPVYESTPQADARLVVEAMHKWNIYHSRREREDNVDIYGENGISDSSKIYPEEVEENIINPKIKNGVIKGNPYVKEEHHLYISEAELQMHPVQIPLWAKQEIYFNSMLKESTIMDEEAASGGELEIERIPTCMIEARPKDLVPIFNYMQTPKLQQTRAPSMDSKINEQVLHRGSEVSGNGRISPRHISESLERTTNYGGEMTSHKSQIEGTEWNNHVMPVETNGFVNNNDTLKPNTQHEIVNNRREHLNTGAHLMRVNSSNSSPENEEHLEENEDEFD* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5745 895 Gene3D - 87 501 IPR015943 GO:0005515
Psa5g5745 895 SMART WD40_4 374 414 IPR001680 GO:0005515
Psa5g5745 895 SMART WD40_4 430 471 IPR001680 GO:0005515
Psa5g5745 895 SMART WD40_4 195 230 IPR001680 GO:0005515
Psa5g5745 895 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 3 863 - -
Psa5g5745 895 MobiDBLite consensus disorder prediction 873 895 - -
Psa5g5745 895 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 863 IPR045142 GO:0006914
Psa5g5745 895 SUPERFAMILY WD40 repeat-like 89 473 IPR036322 GO:0005515
Psa5g5745 895 Pfam Breast carcinoma amplified sequence 3 523 760 IPR022175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5745 Psa-Chr5 499287067 499292487 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5745 - - gmx:100784596 1318.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5745 5 499287067 499292487 Psa5g5745 5 499287067 499292487 ECH