Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5743 ATGCAGCTGCATATATCTCCAAGTTTGAGGCATGTTACAGTGCTACCAGGAAAAGGACTTAAAGAGTTTATCAAAGTGAAAGTTGCGTCGAGGCGTCTTTCTTATAGGATGCTTTTCTATTCCCTCTTGTTCTTCACTTTTCTTCTGAGGTTTGTGTTTGTTTTAACAGCTGTGGATGGCATTGATGGCGAAAACAAGTGCTCAACCATAGGTTGTCTAGGAAAAAAATTAGGGCCAAGGATTTTGGGTAGACGACCCGAATCAACTGTCCCAGAAGTGATATACCAAACTTTAGATGAACCTCTTGGCAATGATGAACTAAAGGGAAGGGTTGATATTCCACAGACTTTAGAAGAGTTCATGATTAATATGAAGGAAGGTCGATATGATGTCAAGACATTTGCAGTTAAACTTAGAGAAATGGTAACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAATATCTATATCGCCACGTAGCATCGAGCAGCATACCGAAACAACTTCATTGCCTTGACTTGAGGTTGGCGCATGAGCACACAAACAACGCGGCTGCGCGCCTACAGCTACCCTCTGCAGAACTAGTTCCTGCCCTTGTTGACAATTCGTACTTCCACTTTGTCTTAGCCTCAGATAACGTGCTCGCCGCCTCGGTGGTTGCAACGTCACTTGTTCGCAATTGTTTACGACCTAAGAAGGTTGTTATACACATTATTACAGACAGAAAGACTTATTATCCAATGCAGGCTTGGTTCTCATTGCATCCTTTATTACCTGCTGTGATTGAGGTTAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTTCCTGTTTTAGAAGCAATGGAGAAAGATCAAAAGGTGCGGTCGCAGTTTCGAGGAGGTTCATCAGCTATAGTTGCAAATACCTCTGAGAAACCAAATGTTATCGCATCAAAATTGCAAGCACTCAGTCCTAAGTACAATTCAGTCATGAACCACATCCGGATACATCTACCCGAGTTGTATCCAAGTCTTAACAAGGTGGTCTTCCTCGACGACGACATTGTCGTACAAGCCGATCTTACACCTCTGTGGGACATTGACATGAATGGAAAAGTTAATGGAGCAGTGGAAACATGTCATGGAGAAGACAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTTTCTCACCCTCTAATATCCAAAAATTTCAGTCCCGACGAATGTGCTTGGGCATATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCAATACATATCATTATTGGGTTGAGCAAAATATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACATTATAGATCCTTTCTGGCACATGCTGGGATTAGGATATCAGGAAAACACAAATGTTGCTGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGACATAGCTTTTCCACAACTAAAGTCATTGTGGACAAAATACGTCGACTTCTCAGATAAGTTCATTAAAAGCTGTCACATTAGAGCATGA 1599 0.4184 MQLHISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDGIDGENKCSTIGCLGKKLGPRILGRRPESTVPEVIYQTLDEPLGNDELKGRVDIPQTLEEFMINMKEGRYDVKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNCLRPKKVVIHIITDRKTYYPMQAWFSLHPLLPAVIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIASKLQALSPKYNSVMNHIRIHLPELYPSLNKVVFLDDDIVVQADLTPLWDIDMNGKVNGAVETCHGEDKFVMSKRLKSYLNFSHPLISKNFSPDECAWAYGMNIFDLEAWRKTNISNTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTNVADVENAGVIHFNGRAKPWLDIAFPQLKSLWTKYVDFSDKFIKSCHIRA* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5743 532 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 530 - -
Psa5g5743 532 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Psa5g5743 532 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 526 IPR029044 -
Psa5g5743 532 CDD GT8_like_1 207 519 - -
Psa5g5743 532 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 530 IPR029993 GO:0047262
Psa5g5743 532 Pfam Glycosyl transferase family 8 210 506 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5743 Psa-Chr5 499059643 499065017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5743 1 532 Glycosyltransferase AT5G54690 78.277 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5743 K20867 - gmx:100812550 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5743 5 499059643 499065017 Psa5g5743 5 499059643 499065017 ECH