Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5728 ATGGTAGCTATGGCTATGGCTTCTCTTCAGAGTTCCATGTCCTCACTCTCCCTCTCCTCCAACTCTTTCTTAGGCCAACCTCTCTCTCCCATCACTCTCTCCCCTTTTCTTCAGGGTAAGCCAACAGAGAAGAAATGTCTTATTGTAATGAAGCTTAAACGATGGGAGCGAAAGGAATGTAAACCAAACAGCCTTCCCGTATTACACAAATTGCATGTTAAAGTTGGAGATACAGTGAAAGTCATATCGGGACATGAAAAGGGTCAAATAGGGGAGATTACTAAGATCTTCAAACACAACAGCAGTGTCATTGTTAAAGACATAAACTTGAAGACAAAGCATGTGAAAAGTAACCAAGAGGGAGAACCCGGACAAATAAATAAGGTCGAAGCTCCTATCCACAGTTCAAATGTGATGCTTTACTCCAAAGAAAAGGATGTAACAAGCCGCGTAGGTCATAAAGTTCTTGAAAATGGTAAAAGAGTTCGCTACCTGATAAAAACTGGAGAGATAATTGATAGTGAAGAAAATTGGAAGAAACTGAAGGAAGCTAATAAGAAAACTGCAGAAGTTGCTGCTACCTAG 585 0.4051 MVAMAMASLQSSMSSLSLSSNSFLGQPLSPITLSPFLQGKPTEKKCLIVMKLKRWERKECKPNSLPVLHKLHVKVGDTVKVISGHEKGQIGEITKIFKHNSSVIVKDINLKTKHVKSNQEGEPGQINKVEAPIHSSNVMLYSKEKDVTSRVGHKVLENGKRVRYLIKTGEIIDSEENWKKLKEANKKTAEVAAT* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5728 194 SMART kow_9 72 99 IPR005824 -
Psa5g5728 194 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 6 193 IPR003256 GO:0003735|GO:0005840|GO:0006412
Psa5g5728 194 Pfam KOW motif 75 105 IPR005824 -
Psa5g5728 194 SUPERFAMILY Translation proteins SH3-like domain 69 171 IPR008991 -
Psa5g5728 194 CDD KOW_RPL26 76 140 IPR041988 GO:0003723
Psa5g5728 194 Gene3D - 66 171 IPR014722 -
Psa5g5728 194 Hamap 50S ribosomal protein L24 [rplX]. 71 167 IPR003256 GO:0003735|GO:0005840|GO:0006412
Psa5g5728 194 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 108 172 IPR003256 GO:0003735|GO:0005840|GO:0006412
Psa5g5728 194 ProSitePatterns Ribosomal protein L24 signature. 76 93 IPR005825 GO:0003735|GO:0005840|GO:0006412
Psa5g5728 194 PANTHER 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC 6 193 - -
Psa5g5728 194 TIGRFAM rplX_bact: ribosomal protein uL24 71 172 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5728 K02895 - gmx:100306643 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5728 5 498569469 498571642 Psa5g5728 5 498569469 498571642 ECH