Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5709 ATGGCAGTCAAACTTTACATCGTGTACTACTCCATGTATGGACATGTGGAGAAACTGGCAGAAGAAATAAAGAAAGGAGCTTCTTCTGTGGAAGGTGTTGAGGCCAAACTGTGGCAGGTACCTGAGATACTGCAAGAGGATGTGCTTGGTAAGATGAGTGCACCACCCAAGAGTGATGTACCAATCATCACCCCGAATGAACTCGCTGAGGCTGATGGCTTTGTGTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCTTTTCTAGACGGTACTGGTGGTTTATGGAGATCACAACAGCTCGCAGGCAAGCCTGCCGGAATCTTCTACAGCACCGGCTCTCAAGGCGGGGGCCAAGAGACTACAGCGCTTACTGCTATTACTCAGCTGGTTCATCATGGAATGATATTTGTTCCAATTGGTTATACGTTTGGAGCCGGCATGTTCGAGATGGAGAAAGTGAAAGGTGGAAGTCCATATGGTGCAGGAACATATGCCGGAGACGGCTCAAGGCAGCCGAGTGAGCTTGAATTGGAACAAGCATTCCATCAAGGGAAATATCTTGCCACCATCACAAAGAAACTCAAGGAAGCTGCATAA 612 0.4755 MAVKLYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPEILQEDVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDGTGGLWRSQQLAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTYAGDGSRQPSELELEQAFHQGKYLATITKKLKEAA* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5709 203 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
Psa5g5709 203 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Psa5g5709 203 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
Psa5g5709 203 PANTHER FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED 5 203 - -
Psa5g5709 203 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
Psa5g5709 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 5 203 - -
Psa5g5709 203 Gene3D - 1 201 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5709 Psa-Chr5 496586467 496589053 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5709 K03809 - gmx:100499870 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5709 5 496586467 496589053 Psa5g5709 5 496586467 496589053 ECH